BO28536.complete Sequence
3577 bp assembled on 2011-08-31
GenBank Submission: KX795243
> BO28536.complete
GAAGTTATCAGTCGACATGGCCAACAGCAGCCGAAGTCGGGCCATTTTGA
GCGTTAATCTCGATGCGGTCATGGCCAACGATCCGCTGAGGGAGCTCTTC
GAGGCCTGCAAAACGGGCGAGATCGCCAAGGTGAAGAAGCTAATAACGCC
TCAGACCGTGAACGCCAGGGATACGGCGGGACGCAAATCCACACCATTGC
ATTTCGCAGCGGGTTATGGACGCCGGGAAGTGGTTGAATTCCTGCTGAAC
AGCGGCGCCTCCATACAGGCGTGTGACGAGGGTGGGCTGCACCCGCTGCA
CAACTGTTGCTCCTTTGGCCACGCCGAGGTAGTTCGATTGTTGCTGAAGG
CAGGTGCCAGTCCAAACACCACCGACAACTGGAACTACACGCCATTGCAC
GAGGCGGCCAGCAAGGGCAAGGTGGATGTGTGCCTGGCTCTGTTGCAGCA
TGGCGCAAACCATACGATCCGCAACTCGGAGCAGAAGACACCACTGGAGC
TGGCGGACGAGGCGACGCGTCCCGTATTGACCGGCGAATATCGAAAGGAT
GAGCTGCTTGAAGCCGCACGCTCGGGGGCCGAGGATCGCCTGCTGGCCCT
ACTCACGCCACTCAATGTCAACTGTCATGCCAGCGATGGACGACGCTCAA
CGCCGCTCCATCTGGCAGCGGGCTACAATCGGATCGGCATCGTGGAAATT
CTGCTGGCCAACGGAGCGGATGTACATGCTAAGGACAAGGGCGGTCTGGT
GCCGCTGCACAATGCCTGCTCCTACGGACACTTCGATGTGACCAAGCTGC
TTATCCAGGCGGGCGCCAATGTCAACGCCAACGATCTGTGGGCCTTTACG
CCGCTCCACGAGGCCGCCTCCAAAAGTCGCGTCGAGGTCTGCAGCCTGCT
GCTCAGTCGTGGAGCGGATCCCACCCTCCTAAACTGCCACAGCAAGTCGG
CCATCGATGCGGCGCCCACCAGGGAGCTGAGAGAGCGGATTGCCTTTGAA
TACAAGGGTCACTGCCTGCTGGACGCCTGTCGAAAGTGTGATGTGTCCCG
TGCCAAGAAGCTGGTATGCGCAGAGATTGTTAACTTCGTGCATCCATATA
CAGGAGACACTCCGCTCCACCTGGCCGTTGTCAGTCCGGATGGGAAGCGC
AAGCAGCTGATGGAACTGCTGACCAGAAAGGGATCCTTGCTGAACGAGAA
AAACAAGGCTTTCCTCACGCCCCTGCATTTGGCTGCCGAGCTGCTTCACT
ACGATGCCATGGAGGTGCTGCTAAAGCAGGGCGCCAAGGTTAATGCATTG
GACAGTCTTGGACAAACGCCACTGCATCGGTGCGCCCGTGATGAGCAAGC
GGTGCGACTGCTGCTCTCGTACGCAGCGGACACGAATATCGTTTCCCTTG
AGGGACTTACGGCCGCTCAATTGGCCTCGGACAGCGTGCTGAAGCTGCTC
AAGAATCCTCCGGACAGTGAGACACATTTACTGGAGGCAGCCAAGGCGGG
AGATCTGGACACTGTGCGCCGTATAGTGCTCAACAATCCGATTTCGGTCA
ATTGCCGGGATTTGGACGGACGACATTCCACACCTTTGCACTTTGCTGCT
GGGTTTAATAGAGTGCCAGTGGTTCAGTTTCTTTTGGAACACGGCGCCGA
GGTTTATGCGGCTGACAAGGGCGGACTGGTGCCCCTGCACAATGCCTGCT
CTTATGGGCACTATGAGGTAACCGAACTGCTGGTCAAGCACGGAGCCAAT
GTAAATGTATCGGATTTGTGGAAGTTTACTCCTCTTCATGAAGCTGCCGC
CAAGGGAAAGTATGATATTTGCAAGCTGCTCTTGAAACATGGCGCTGATC
CAATGAAGAAGAATCGGGATGGCGCGACACCAGCGGATTTGGTTAAGGAA
TCTGATCACGATGTTGCAGAGCTGCTGAGAGGACCGTCCGCTCTGCTAGA
CGCAGCAAAGAAAGGAAACTTGGCACGGGTACAGCGATTGGTTACACCGG
AATCCATTAATTGCCGGGACGCGCAGGGCAGGAATTCCACACCACTTCAC
CTGGCCGCCGGATATAACAACTTTGAGTGTGCCGAGTACCTTCTGGAGAA
TGGAGCCGATGTTAATGCACAGGACAAGGGGGGACTAATACCTCTGCACA
ATGCCAGCAGCTATGGGCATTTGGATATTGCGGCACTGCTAATTAAGCAC
AAGACGGTTGTCAATGCGACAGATAAATGGGGATTCACACCGCTCCACGA
GGCTGCACAGAAGGGGCGCACTCAATTGTGCTCGCTCTTGTTGGCCCACG
GTGCCGATGCCTATATGAAAAACCAGGAGGGGCAGACGCCCATTGAGTTG
GCCACGGCAGATGATGTTAAGTGCTTGCTCCAGGACGCGATGGCCACCTC
GTTGAGTCAACAGGCGTTGAGTGCTTCCACGCAATCGCTGACAAGCAGTT
CCCCGGCACCAGATGCAACTGCTGCTGCGGCTCCGGGCACATCTTCATCG
TCCTCATCCGCAATCCTATCGCCCACCACGGAAACGGTGTTGCTGCCCAC
CGGTGCCTCCATGATTCTGAGTGTTCCTGTTCCACTTCCACTGTCCAGTA
GCACGCGCATCAGTCCCGCCCAAGGAGCAGAGGCCAATGGGGCTGAGGGC
TCCTCTTCGGATGATCTACTGCCGGATGCGGATACCATAACAAATGTGTC
CGGATTCCTAAGCAGCCAGCAGCTGCATCATCTAATCGAACTGTTCGAGC
GCGAACAAATCACCTTGGACATTCTAGCCGAGATGGGCCACGACGATCTC
AAGCAGGTGGGCGTCTCCGCCTACGGCTTCCGCCACAAGATACTCAAGGG
AATCGCCCAGCTGAGGTCCACCACAGGCATTGGTAACAACGTGAATCTAT
GCACATTGTTGGTGGACTTGCTGCCGGACGATAAGGAGTTTGTGGCCGTC
GAGGAGGAGATGCAGGCCACGATTCGTGAACATCGTGATAATGGACAGGC
TGGAGGTTATTTCACTCGATATAACATCATTCGGGTGCAAAAGGTACAAA
ATCGAAAGCTGTGGGAGCGTTATGCTCATCGACGGCAAGAGATCGCCGAG
GAGAATTTCCTGCAGTCCAACGAGCGTATGCTCTTCCACGGTAGTCCCTT
CATCAACGCAATTGTGCAACGCGGATTCGACGAGCGCCACGCCTACATTG
GCGGCATGTTTGGGGCTGGCATTTATTTCGCCGAGCATAGCTCGAAAAGC
AACCAGTATGTGTACGGAATTGGCGGCGGCATTGGCTGTCCCTCGCACAA
GGATAAGTCCTGCTACGTGTGTCCTAGACAATTGCTGCTGTGCCGAGTGG
CGTTAGGCAAATCCTTCTTGCAATACAGTGCAATGAAGATGGCCCATGCA
CCGCCGGGACACCACTCGGTGGTGGGCAGACCCTCGGCGGGTGGCTTGCA
TTTCGCCGAATACGTTGTCTATCGGGGCGAACAGTCTTATCCGGAGTACT
TGATAACCTACCAAATCGTCAAGCCCGATGACAGCAGTAGTGGAACGGAG
GATACAAGAGCAAGCTTTCTAGACCAT
BO28536.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:23:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tnks-RB | 4563 | CG4719-PB | 1..3543 | 17..3559 | 17715 | 100 | Plus |
| Tnks-RA | 3546 | CG4719-PA | 1..3543 | 17..3559 | 17715 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:23:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tnks-RB | 5486 | CG4719-RB | 500..4042 | 17..3559 | 17715 | 100 | Plus |
| Tnks-RA | 5486 | CG4719-RA | 500..4042 | 17..3559 | 17715 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:23:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 25655469..25657350 | 2877..996 | 9410 | 100 | Minus |
| 3R | 32079331 | 3R | 25657411..25658198 | 999..212 | 3925 | 99.9 | Minus |
| 3R | 32079331 | 3R | 25654895..25655188 | 3327..3034 | 1470 | 100 | Minus |
| 3R | 32079331 | 3R | 25660590..25660787 | 214..17 | 990 | 100 | Minus |
| 3R | 32079331 | 3R | 25655250..25655411 | 3036..2875 | 810 | 100 | Minus |
| 3R | 32079331 | 3R | 25654670..25654828 | 3484..3326 | 795 | 100 | Minus |
| 3R | 32079331 | 3R | 25654535..25654612 | 3559..3482 | 390 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 01:23:04 has no hits.
BO28536.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-31 09:30:38 Download gff for
BO28536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tankyrase-RA | 495..4037 | 17..3561 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:52:32 Download gff for
BO28536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tnks-RA | 500..4042 | 17..3561 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:24:23 Download gff for
BO28536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tnks-RA | 500..4042 | 17..3561 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:24:23 Download gff for
BO28536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 25654532..25654609 | 3485..3561 | 97 | <- | Minus |
| 3R | 25654670..25654826 | 3328..3484 | 100 | <- | Minus |
| 3R | 25654895..25655187 | 3035..3327 | 100 | <- | Minus |
| 3R | 25655252..25655409 | 2877..3034 | 100 | <- | Minus |
| 3R | 25655470..25657350 | 996..2876 | 100 | <- | Minus |
| 3R | 25657415..25658197 | 213..995 | 100 | <- | Minus |
| 3R | 25660592..25660787 | 17..212 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:52:32 Download gff for
BO28536.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 21480254..21480331 | 3485..3561 | 97 | <- | Minus |
| arm_3R | 21480392..21480548 | 3328..3484 | 100 | <- | Minus |
| arm_3R | 21480617..21480909 | 3035..3327 | 100 | <- | Minus |
| arm_3R | 21480974..21481131 | 2877..3034 | 100 | <- | Minus |
| arm_3R | 21481192..21483072 | 996..2876 | 100 | <- | Minus |
| arm_3R | 21483137..21483919 | 213..995 | 100 | <- | Minus |
| arm_3R | 21486314..21486509 | 17..212 | 100 | | Minus |
BO28536.pep Sequence
Translation from 16 to 3577
> BO28536.pep
MANSSRSRAILSVNLDAVMANDPLRELFEACKTGEIAKVKKLITPQTVNA
RDTAGRKSTPLHFAAGYGRREVVEFLLNSGASIQACDEGGLHPLHNCCSF
GHAEVVRLLLKAGASPNTTDNWNYTPLHEAASKGKVDVCLALLQHGANHT
IRNSEQKTPLELADEATRPVLTGEYRKDELLEAARSGAEDRLLALLTPLN
VNCHASDGRRSTPLHLAAGYNRIGIVEILLANGADVHAKDKGGLVPLHNA
CSYGHFDVTKLLIQAGANVNANDLWAFTPLHEAASKSRVEVCSLLLSRGA
DPTLLNCHSKSAIDAAPTRELRERIAFEYKGHCLLDACRKCDVSRAKKLV
CAEIVNFVHPYTGDTPLHLAVVSPDGKRKQLMELLTRKGSLLNEKNKAFL
TPLHLAAELLHYDAMEVLLKQGAKVNALDSLGQTPLHRCARDEQAVRLLL
SYAADTNIVSLEGLTAAQLASDSVLKLLKNPPDSETHLLEAAKAGDLDTV
RRIVLNNPISVNCRDLDGRHSTPLHFAAGFNRVPVVQFLLEHGAEVYAAD
KGGLVPLHNACSYGHYEVTELLVKHGANVNVSDLWKFTPLHEAAAKGKYD
ICKLLLKHGADPMKKNRDGATPADLVKESDHDVAELLRGPSALLDAAKKG
NLARVQRLVTPESINCRDAQGRNSTPLHLAAGYNNFECAEYLLENGADVN
AQDKGGLIPLHNASSYGHLDIAALLIKHKTVVNATDKWGFTPLHEAAQKG
RTQLCSLLLAHGADAYMKNQEGQTPIELATADDVKCLLQDAMATSLSQQA
LSASTQSLTSSSPAPDATAAAAPGTSSSSSSAILSPTTETVLLPTGASMI
LSVPVPLPLSSSTRISPAQGAEANGAEGSSSDDLLPDADTITNVSGFLSS
QQLHHLIELFEREQITLDILAEMGHDDLKQVGVSAYGFRHKILKGIAQLR
STTGIGNNVNLCTLLVDLLPDDKEFVAVEEEMQATIREHRDNGQAGGYFT
RYNIIRVQKVQNRKLWERYAHRRQEIAEENFLQSNERMLFHGSPFINAIV
QRGFDERHAYIGGMFGAGIYFAEHSSKSNQYVYGIGGGIGCPSHKDKSCY
VCPRQLLLCRVALGKSFLQYSAMKMAHAPPGHHSVVGRPSAGGLHFAEYV
VYRGEQSYPEYLITYQIVKPDDSSSGTEDTRASFLDH
BO28536.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:04:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tnks-PB | 1520 | CG4719-PB | 1..1181 | 1..1181 | 6113 | 100 | Plus |
| Tnks-PA | 1181 | CG4719-PA | 1..1181 | 1..1181 | 6113 | 100 | Plus |
| Ank2-PW | 1309 | CG42734-PW | 158..951 | 20..807 | 774 | 30.3 | Plus |
| Ank2-PZ | 4233 | CG42734-PZ | 158..951 | 20..807 | 774 | 30.3 | Plus |
| Ank2-PN | 1159 | CG34416-PN | 18..801 | 30..807 | 770 | 30.4 | Plus |
| Ank2-PN | 1159 | CG34416-PN | 7..141 | 669..799 | 177 | 32.6 | Plus |
