BO28548.complete Sequence
1477 bp assembled on 2011-07-13
GenBank Submission: KX795088
> BO28548.complete
GAAGTTATCAGTCGACATGGCTAGCAACTACGAGGGCTACAAGTCGCCGC
TGAGCACCCGGTACGCCAGCAAAGAGATGCAGTTCCTCTTCAGTGACCAG
AACAAGTTCTCCACCTGGCGCCGGTTGTGGGTGTGGCTGGCGAAGGCGGA
GAGCAGGCTGGGACTAGAGATCAGCGATGCCCAGATTGCCGAGATGGAGC
TCCAGATCAGCAACATCGACTTTGAGGCGGCCGCCGCCGAGGAGCGACTT
ACGCGCCACGACGTAATGGCCCACGTCCATGTCTTTGCCAAACAGTGTCC
CTCTGCTGCGCCGGTGATCCATTTGGGAGCAACCTCGTGCTATGTGGGCG
ACAACACTGATCTGATTGTACTGAGGGACGCTCTTAAACTGCTCCTTCCA
CGAGTCGCCAGCGTGATAGCTCGTCTAAGCCAGTTTGCCCAGAGCTACAA
GGATCAGCCCACGTTGGGATTCACCCATCTCCAGCCTGCGCAGTTGACCA
CGGTTGGCAAGCGGGCGTGCCTGTGGATCCAGGATCTGATCATGGACGAA
CGCGCGCTGTCCCGCTGTTTAGAGGACCTGCGCTTCCGTGGAGTCAAGGG
AACTACTGGTACCCAGGCCTCGTTCCTGCAACTTTTCAATGGGGATGGCG
AGAAGGTGAAGCAGCTGGATCAGTTGGTCACCGAACTGGCTGGCTTCAAG
AAGGCCTATGCGGTAACCGGTCAAACATACTCCCGAAAGGTGGATGTGGA
GATCGTGGCCGCGCTTGCCAGTCTCGGCACCACCATCCACAAGATGTGCT
CCGATCTGCGCATCCTCGCTTCTCGCAAAGAGCTGGAGGAGCCCTTCGAG
AGCACTCAGATTGGCTCCTCGGCCATGCCGTACAAGAGGAACCCTATGCG
CTCGGAGCGTTGTTGCGCCCTGGCCCGTCACCTCATCACCTTGTTCAGCA
GTGCTGCTAATACACATGCCACTCAGTGGCTGGAACGCACTCTGGATGAC
TCTGCCAACAGGAGGTTGACCCTATCCGAGGCCTTCCTGGCTGCAGATGC
CGCCCTGCTTACTCTGCTGAACATCTCGCAGGGACTGGTCGTTTACCCAA
AGGTGATTGAACGGCACATTTCCCAAGAGCTGCCGTTCATGTCCACAGAG
AACATAATCATGGCCATGGTGAAGGCGGGAGGAGATCGCCAGGTGTGCCA
CGAGAAGATTCGCGTGCTGTCCCAGGAGGCCGGAGCCCAGGTGAAGCAGC
ATGGCAAGGACAACGACCTCGTGGTTCGAGTGCGAAAGGATCCCTACTTT
TCGCCCATCCTGGAGCAACTGGACACCATACTGGATGCCAAAACCTTTAC
TGGACGTGCCAGCGACCAAGTGGGCGAGTTCGTCAAGGAGGAAGTGGAAC
CCGTGCTGGCACGCTACTCCGAAGCCCTGAAGAACGTTCAAGACGTCAAA
CTGAACATCGCAAGCTTTCTAGACCAT
BO28548.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:59:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
AdSL-RA | 1446 | CG3590-PA | 1..1443 | 17..1459 | 7215 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:59:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
AdSL-RA | 2341 | CG3590-RA | 127..1569 | 17..1459 | 7215 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:59:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 17019552..17020994 | 1459..17 | 7215 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:59:34 has no hits.
BO28548.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-13 12:52:53 Download gff for
BO28548.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3590-RA | 95..1537 | 17..1461 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:15:09 Download gff for
BO28548.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3590-RA | 127..1569 | 17..1461 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:32:35 Download gff for
BO28548.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
AdSL-RA | 127..1569 | 17..1461 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:32:35 Download gff for
BO28548.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 17019550..17020994 | 17..1461 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:15:09 Download gff for
BO28548.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 12845272..12846716 | 17..1461 | 99 | | Minus |
BO28548.pep Sequence
Translation from 16 to 1477
> BO28548.pep
MASNYEGYKSPLSTRYASKEMQFLFSDQNKFSTWRRLWVWLAKAESRLGL
EISDAQIAEMELQISNIDFEAAAAEERLTRHDVMAHVHVFAKQCPSAAPV
IHLGATSCYVGDNTDLIVLRDALKLLLPRVASVIARLSQFAQSYKDQPTL
GFTHLQPAQLTTVGKRACLWIQDLIMDERALSRCLEDLRFRGVKGTTGTQ
ASFLQLFNGDGEKVKQLDQLVTELAGFKKAYAVTGQTYSRKVDVEIVAAL
ASLGTTIHKMCSDLRILASRKELEEPFESTQIGSSAMPYKRNPMRSERCC
ALARHLITLFSSAANTHATQWLERTLDDSANRRLTLSEAFLAADAALLTL
LNISQGLVVYPKVIERHISQELPFMSTENIIMAMVKAGGDRQVCHEKIRV
LSQEAGAQVKQHGKDNDLVVRVRKDPYFSPILEQLDTILDAKTFTGRASD
QVGEFVKEEVEPVLARYSEALKNVQDVKLNIASFLDH
BO28548.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:57:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
AdSL-PA | 481 | CG3590-PA | 1..481 | 1..481 | 2432 | 100 | Plus |