Clone BO28548 Report

Search the DGRC for BO28548

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:285
Well:48
Vector:pDNR-Dual
Associated Gene/TranscriptCG3590-RA
Protein status:BO28548.pep: Imported from assembly
Sequenced Size:1477

Clone Sequence Records

BO28548.complete Sequence

1477 bp assembled on 2011-07-13

GenBank Submission: KX795088

> BO28548.complete
GAAGTTATCAGTCGACATGGCTAGCAACTACGAGGGCTACAAGTCGCCGC
TGAGCACCCGGTACGCCAGCAAAGAGATGCAGTTCCTCTTCAGTGACCAG
AACAAGTTCTCCACCTGGCGCCGGTTGTGGGTGTGGCTGGCGAAGGCGGA
GAGCAGGCTGGGACTAGAGATCAGCGATGCCCAGATTGCCGAGATGGAGC
TCCAGATCAGCAACATCGACTTTGAGGCGGCCGCCGCCGAGGAGCGACTT
ACGCGCCACGACGTAATGGCCCACGTCCATGTCTTTGCCAAACAGTGTCC
CTCTGCTGCGCCGGTGATCCATTTGGGAGCAACCTCGTGCTATGTGGGCG
ACAACACTGATCTGATTGTACTGAGGGACGCTCTTAAACTGCTCCTTCCA
CGAGTCGCCAGCGTGATAGCTCGTCTAAGCCAGTTTGCCCAGAGCTACAA
GGATCAGCCCACGTTGGGATTCACCCATCTCCAGCCTGCGCAGTTGACCA
CGGTTGGCAAGCGGGCGTGCCTGTGGATCCAGGATCTGATCATGGACGAA
CGCGCGCTGTCCCGCTGTTTAGAGGACCTGCGCTTCCGTGGAGTCAAGGG
AACTACTGGTACCCAGGCCTCGTTCCTGCAACTTTTCAATGGGGATGGCG
AGAAGGTGAAGCAGCTGGATCAGTTGGTCACCGAACTGGCTGGCTTCAAG
AAGGCCTATGCGGTAACCGGTCAAACATACTCCCGAAAGGTGGATGTGGA
GATCGTGGCCGCGCTTGCCAGTCTCGGCACCACCATCCACAAGATGTGCT
CCGATCTGCGCATCCTCGCTTCTCGCAAAGAGCTGGAGGAGCCCTTCGAG
AGCACTCAGATTGGCTCCTCGGCCATGCCGTACAAGAGGAACCCTATGCG
CTCGGAGCGTTGTTGCGCCCTGGCCCGTCACCTCATCACCTTGTTCAGCA
GTGCTGCTAATACACATGCCACTCAGTGGCTGGAACGCACTCTGGATGAC
TCTGCCAACAGGAGGTTGACCCTATCCGAGGCCTTCCTGGCTGCAGATGC
CGCCCTGCTTACTCTGCTGAACATCTCGCAGGGACTGGTCGTTTACCCAA
AGGTGATTGAACGGCACATTTCCCAAGAGCTGCCGTTCATGTCCACAGAG
AACATAATCATGGCCATGGTGAAGGCGGGAGGAGATCGCCAGGTGTGCCA
CGAGAAGATTCGCGTGCTGTCCCAGGAGGCCGGAGCCCAGGTGAAGCAGC
ATGGCAAGGACAACGACCTCGTGGTTCGAGTGCGAAAGGATCCCTACTTT
TCGCCCATCCTGGAGCAACTGGACACCATACTGGATGCCAAAACCTTTAC
TGGACGTGCCAGCGACCAAGTGGGCGAGTTCGTCAAGGAGGAAGTGGAAC
CCGTGCTGGCACGCTACTCCGAAGCCCTGAAGAACGTTCAAGACGTCAAA
CTGAACATCGCAAGCTTTCTAGACCAT

BO28548.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:59:35
Subject Length Description Subject Range Query Range Score Percent Strand
AdSL-RA 1446 CG3590-PA 1..1443 17..1459 7215 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:59:36
Subject Length Description Subject Range Query Range Score Percent Strand
AdSL-RA 2341 CG3590-RA 127..1569 17..1459 7215 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:59:33
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 17019552..17020994 1459..17 7215 100 Minus
Blast to na_te.dros performed on 2014-11-26 16:59:34 has no hits.

BO28548.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-13 12:52:53 Download gff for BO28548.complete
Subject Subject Range Query Range Percent Splice Strand
CG3590-RA 95..1537 17..1461 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:15:09 Download gff for BO28548.complete
Subject Subject Range Query Range Percent Splice Strand
CG3590-RA 127..1569 17..1461 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:32:35 Download gff for BO28548.complete
Subject Subject Range Query Range Percent Splice Strand
AdSL-RA 127..1569 17..1461 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:32:35 Download gff for BO28548.complete
Subject Subject Range Query Range Percent Splice Strand
3R 17019550..17020994 17..1461 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:15:09 Download gff for BO28548.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12845272..12846716 17..1461 99   Minus

BO28548.pep Sequence

Translation from 16 to 1477

> BO28548.pep
MASNYEGYKSPLSTRYASKEMQFLFSDQNKFSTWRRLWVWLAKAESRLGL
EISDAQIAEMELQISNIDFEAAAAEERLTRHDVMAHVHVFAKQCPSAAPV
IHLGATSCYVGDNTDLIVLRDALKLLLPRVASVIARLSQFAQSYKDQPTL
GFTHLQPAQLTTVGKRACLWIQDLIMDERALSRCLEDLRFRGVKGTTGTQ
ASFLQLFNGDGEKVKQLDQLVTELAGFKKAYAVTGQTYSRKVDVEIVAAL
ASLGTTIHKMCSDLRILASRKELEEPFESTQIGSSAMPYKRNPMRSERCC
ALARHLITLFSSAANTHATQWLERTLDDSANRRLTLSEAFLAADAALLTL
LNISQGLVVYPKVIERHISQELPFMSTENIIMAMVKAGGDRQVCHEKIRV
LSQEAGAQVKQHGKDNDLVVRVRKDPYFSPILEQLDTILDAKTFTGRASD
QVGEFVKEEVEPVLARYSEALKNVQDVKLNIASFLDH

BO28548.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:57:05
Subject Length Description Subject Range Query Range Score Percent Strand
AdSL-PA 481 CG3590-PA 1..481 1..481 2432 100 Plus