Clone BO28567 Report

Search the DGRC for BO28567

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:285
Well:67
Vector:pDNR-Dual
Associated Gene/TranscripteIF-4E-RA
Protein status:BO28567.pep: Inserted from web
Sequenced Size:816

Clone Sequence Records

BO28567.complete Sequence

812 bp assembled on 2019-05-30

GenBank Submission: MN044633

> BO28567.complete
GAAGTTATCAGTCGACATGCAGAGCGACTTTCACAGAATGAAGAACTTTG
CCAATCCCAAGTCCATGTTCAAAACCAGCGCCCCCAGCACCGAGCAGGGT
CGTCCGGAACCACCAACTTCGGCTGCAGCGCCCGCCGAGGCTAAGGATGT
CAAGCCCAAGGAGGACCCACAGGAGACTGGTGAACCAGCAGGCAACACTG
CAACCACTACTGCTCCTGCCGGCGACGATGCTGTGCGCACCGAGCATTTA
TACAAACACCCGCTCATGAATGTCTGGACGCTGTGGTACCTTGAAAACGA
TCGGTCCAAGTCCTGGGAGGACATGCAAAACGAGATCACCAGCTTCGATA
CCGTCGAGGACTTCTGGAGCCTATACAACCACATCAAGCCCCCATCAGAG
ATCAAGCTGGGTAGTGACTACTCGCTATTCAAGAAGAACATTCGTCCCAT
GTGGGAGGATGCAGCCAACAAACAGGGCGGTCGTTGGGTAATTACCCTTA
ACAAAAGCTCCAAGACCGATCTGGATAACCTATGGCTCGATGTGCTGCTC
TGCCTGATTGGTGAGGCCTTCGATCACTCCGATCAGATCTGCGGCGCTGT
TATAAACATTCGCGGCAAGAGCAACAAGATATCCATCTGGACTGCCGACG
GAAACAACGAGGAAGCTGCCCTTGAGATTGGTCACAAGCTGCGCGATGCC
TTGCGTCTGGGACGCAACAACTCGCTGCAGTATCAGTTGCACAAGGACAC
GATGGTCAAGCAGGGCTCCAACGTGAAATCGATCTACACTTTGGCAAGCT
TTCTAGACCATT

BO28567.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:52:27
Subject Length Description Subject Range Query Range Score Percent Strand
eIF-4E-RI 780 CG4035-PI 1..777 17..793 3840 99.6 Plus
eIF-4E-RH 780 CG4035-PH 1..777 17..793 3840 99.6 Plus
eIF-4E-RD 780 CG4035-PD 1..777 17..793 3840 99.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:52:29
Subject Length Description Subject Range Query Range Score Percent Strand
eIF-4E-RI 1793 CG4035-RI 760..1538 15..793 3850 99.6 Plus
eIF-4E-RH 1492 CG4035-RH 459..1237 15..793 3850 99.6 Plus
eIF-4E-RD 1723 CG4035-RD 690..1468 15..793 3850 99.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:52:25
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 9400583..9400953 444..74 1855 100 Minus
3L 28110227 3L 9399873..9400033 793..633 790 99.4 Minus
3L 28110227 3L 9400419..9400519 544..444 490 99 Minus
3L 28110227 3L 9400097..9400185 632..544 430 98.9 Minus
X 23542271 X 1158961..1159338 651..274 375 73.3 Minus
3R 32079331 3R 29026520..29026848 642..314 355 73.9 Minus
3L 28110227 3L 9401040..9401098 73..15 295 100 Minus
3L 28110227 3L 6665168..6665336 443..275 290 78.1 Minus
Blast to na_te.dros performed on 2014-11-26 16:52:26 has no hits.

BO28567.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-13 10:17:13 Download gff for BO28567.complete
Subject Subject Range Query Range Percent Splice Strand
eIF-4E-RE 489..1274 17..801 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:11:58 Download gff for BO28567.complete
Subject Subject Range Query Range Percent Splice Strand
eIF-4E-RD 692..1477 17..801 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:29:27 Download gff for BO28567.complete
Subject Subject Range Query Range Percent Splice Strand
eIF-4E-RD 692..1477 17..801 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:29:27 Download gff for BO28567.complete
Subject Subject Range Query Range Percent Splice Strand
3L 9400583..9400953 74..444 100 <- Minus
3L 9401040..9401096 17..73 100   Minus
3L 9399864..9400033 633..801 97 <- Minus
3L 9400097..9400184 545..632 98 <- Minus
3L 9400419..9400518 445..544 99 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:11:58 Download gff for BO28567.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 9392964..9393133 633..801 97 <- Minus
arm_3L 9393197..9393284 545..632 98 <- Minus
arm_3L 9393519..9393618 445..544 99 <- Minus
arm_3L 9393683..9394053 74..444 100 <- Minus
arm_3L 9394140..9394196 17..73 100   Minus

BO28567.pep Sequence

Translation from 16 to 811

> BO28567.pep
MQSDFHRMKNFANPKSMFKTSAPSTEQGRPEPPTSAAAPAEAKDVKPKED
PQETGEPAGNTATTTAPAGDDAVRTEHLYKHPLMNVWTLWYLENDRSKSW
EDMQNEITSFDTVEDFWSLYNHIKPPSEIKLGSDYSLFKKNIRPMWEDAA
NKQGGRWVITLNKSSKTDLDNLWLDVLLCLIGEAFDHSDQICGAVINIRG
KSNKISIWTADGNNEEAALEIGHKLRDALRLGRNNSLQYQLHKDTMVKQG
SNVKSIYTLASFLDH

BO28567.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-05-30 13:18:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF23736-PA 261 GF23736-PA 1..261 1..259 1123 81 Plus
Dana\GF22031-PA 458 GF22031-PA 247..458 31..259 789 65.5 Plus
Dana\GF10894-PA 230 GF10894-PA 51..230 79..259 745 75.1 Plus
Dana\GF10327-PA 271 GF10327-PA 83..271 70..259 657 62.1 Plus
Dana\GF25106-PA 244 GF25106-PA 66..244 80..259 589 56.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-05-30 13:18:38
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG14044-PA 250 GG14044-PA 8..250 19..259 1183 92.6 Plus
Dere\GG15032-PA 229 GG15032-PA 51..229 80..259 743 75.6 Plus
Dere\GG12718-PA 448 GG12718-PA 254..448 64..259 743 67.9 Plus
Dere\GG14453-PA 231 GG14453-PA 52..231 79..259 649 65.2 Plus
Dere\GG14292-PA 244 GG14292-PA 66..244 80..259 581 55 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-05-30 13:18:39
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH16860-PA 275 GH16860-PA 1..275 1..259 1047 74.2 Plus
Dgri\GH15637-PA 233 GH15637-PA 17..233 31..259 710 61.1 Plus
Dgri\GH24331-PA 222 GH24331-PA 41..222 78..259 675 64.8 Plus
Dgri\GH14978-PA 232 GH14978-PA 3..232 34..259 650 52.8 Plus
Dgri\GH12729-PA 300 GH12729-PA 1..300 8..259 619 44.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-05-30 13:18:35
Subject Length Description Subject Range Query Range Score Percent Strand
eIF4E1-PI 259 CG4035-PI 1..259 1..259 1387 100 Plus
eIF4E1-PH 259 CG4035-PH 1..259 1..259 1387 100 Plus
eIF4E1-PD 259 CG4035-PD 1..259 1..259 1387 100 Plus
eIF4E1-PB 259 CG4035-PB 1..259 1..259 1387 100 Plus
eIF4E1-PF 259 CG4035-PF 1..259 1..259 1387 100 Plus
eIF4E1-PE 259 CG4035-PE 1..259 1..259 1387 100 Plus
eIF4E1-PG 259 CG4035-PG 1..259 1..259 1387 100 Plus
eIF4E1-PA 259 CG4035-PA 1..259 1..259 1387 100 Plus
eIF4E1-PC 248 CG4035-PC 8..248 19..259 1289 100 Plus
eIF4E4-PA 229 CG10124-PA 51..227 80..257 724 74.7 Plus
eIF4E7-PA 429 CG32859-PA 250..429 80..259 672 67.8 Plus
eIF4E5-PA 232 CG8277-PA 2..232 36..259 665 53.8 Plus
eIF4E3-PA 244 CG8023-PA 66..244 80..259 614 58.3 Plus
eIF4E6-PC 173 CG1442-PC 32..168 80..215 448 60.6 Plus
eIF4E6-PB 173 CG1442-PB 32..168 80..215 448 60.6 Plus
eIF4E6-PA 173 CG1442-PA 32..168 80..215 448 60.6 Plus
eIF4EHP-PA 223 CG33100-PA 48..211 83..246 258 29.9 Plus
eIF4EHP-PD 242 CG33100-PD 48..211 83..246 258 29.9 Plus
eIF4EHP-PB 248 CG33100-PB 48..172 83..207 210 32 Plus
eIF4EHP-PC 186 CG33100-PC 48..164 83..199 208 33.3 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-05-30 13:18:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14982-PA 311 GI14982-PA 4..310 3..258 749 51.8 Plus
Dmoj\GI12684-PA 246 GI12684-PA 67..246 79..259 721 72.9 Plus
Dmoj\GI13141-PA 238 GI13141-PA 59..238 79..259 638 62.4 Plus
Dmoj\GI13083-PA 125 GI13083-PA 43..125 177..259 414 91.6 Plus
Dmoj\GI16776-PA 198 GI16776-PA 97..162 78..143 229 57.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-05-30 13:18:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12850-PA 198 GL12850-PA 8..198 67..259 972 94.3 Plus
Dper\GL13241-PA 223 GL13241-PA 45..223 80..259 701 69.4 Plus
Dper\GL26506-PA 219 GL26506-PA 16..219 59..259 549 50.2 Plus
Dper\GL14400-PA 233 GL14400-PA 22..233 44..259 546 48.1 Plus
Dper\GL18042-PA 204 GL18042-PA 16..204 43..259 401 41.5 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-05-30 13:18:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA28658-PA 263 GA28658-PA 1..263 1..259 1103 81.8 Plus
Dpse\GA28599-PA 223 GA28599-PA 45..223 80..259 706 70 Plus
Dpse\GA28380-PA 227 GA28380-PA 23..227 46..259 652 59.8 Plus
Dpse\GA24628-PA 234 GA24628-PA 52..234 76..259 594 56.5 Plus
Dpse\GA23005-PA 233 GA23005-PA 22..233 44..259 554 49.1 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-05-30 13:18:45
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24878-PA 269 GM24878-PA 9..269 1..259 1369 97.7 Plus
Dsec\GM13832-PA 229 GM13832-PA 51..229 80..259 727 73.9 Plus
Dsec\GM18997-PA 422 GM18997-PA 243..422 80..259 668 64.4 Plus
Dsec\GM25004-PA 233 GM25004-PA 2..233 36..259 643 52.3 Plus
Dsec\GM25034-PA 244 GM25034-PA 66..244 80..259 596 57.2 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-05-30 13:18:46
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12928-PA 269 GD12928-PA 9..269 1..259 1368 97.7 Plus
Dsim\GD13118-PA 229 GD13118-PA 51..229 80..259 727 73.9 Plus
Dsim\GD14038-PA 233 GD14038-PA 2..233 36..259 642 51.5 Plus
Dsim\GD14067-PA 244 GD14067-PA 66..244 80..259 597 57.2 Plus
Dsim\GD16435-PA 420 GD16435-PA 248..389 80..221 574 67.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-05-30 13:18:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13832-PA 272 GJ13832-PA 1..272 1..259 1061 77.6 Plus
Dvir\GJ19475-PA 323 GJ19475-PA 94..323 33..259 900 75.7 Plus
Dvir\GJ16331-PA 301 GJ16331-PA 1..300 8..258 723 51.5 Plus
Dvir\GJ12668-PA 230 GJ12668-PA 51..230 79..259 721 72.9 Plus
Dvir\GJ13889-PA 238 GJ13889-PA 59..238 79..259 644 62.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-05-30 13:18:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK20927-PA 266 GK20927-PA 1..266 1..259 1103 79.9 Plus
Dwil\GK25580-PA 300 GK25580-PA 114..300 73..259 873 82.9 Plus
Dwil\GK12168-PA 260 GK12168-PA 1..260 8..259 870 64.3 Plus
Dwil\GK14373-PA 235 GK14373-PA 57..235 80..259 820 81.7 Plus
Dwil\GK16243-PA 360 GK16243-PA 166..360 62..259 773 72.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-05-30 13:18:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE21247-PA 269 GE21247-PA 9..269 1..259 1359 96.6 Plus
Dyak\GE16544-PA 448 GE16544-PA 248..448 58..259 746 65.8 Plus
Dyak\GE20475-PA 229 GE20475-PA 51..229 80..259 734 75 Plus
Dyak\GE21642-PA 231 GE21642-PA 2..231 36..259 664 54.5 Plus
Dyak\GE20721-PA 244 GE20721-PA 66..244 80..259 583 55.6 Plus