BO28575.complete Sequence
1537 bp assembled on 2011-07-13
GenBank Submission: KX798130
> BO28575.complete
GAAGTTATCAGTCGACATGAGCGCCACGACTAGAACACCTGCCACACCGG
GGACACCTGGCACTCCCGGCAGCCTGGCCATGGAAGTGGCCCGCGTCCAG
AATTCAGCACTCGCCGAGTTTAAAAAGCCCACGGCGATGGTGCGCCACAA
GAACAAGCCAAAGATCCTTACCGAGGAGAAGTACATCGAGGAGATGTCTA
AGATCATCCAGCGCGACTTCTTTCCCGATCTGGAGCGGCTGCGTGCCCAA
AACGACTACCTGGACGCGGAGTCACGGCGCGACTTTGTACAAATGGCCGA
GATTCGGGAGCGCTACAGTCTGGGCAGGATTTCCGGGACAGGAAGAAGCA
CCAGCCGACGGAATAATGCCATGTCCCCGGCCACATTTGAGACACCAGTG
AGTCAGGCGAAATGTAGCAACACCCCATTGCCAAATTCCCGGGCCACAGA
CACACCATTTTCCACGGACGGCTCCGAGAAGAGCGATGCCGAGGGCAGGG
ACACCACCGCGAAGCTATCGCTGGACGCCTTTCTGCAGAAGTACACCAGC
GAGGATAACCAGAGCTTTCAGGAGATCATCGAAACGGCCGAGGCCAAGCT
GCGCCAAAAATACGCAGTACTGTACAACCATGAGAAGCTCTCCGCAGAGC
AACTGCAGCGGGCCCTAATGCTGCCCAGCATAGAAACGCAATTCGAGGAG
CCAGATCCGCTGAGAAAGATCGAAACCTGGAACTACACCAACATGAATTC
CATTATGTACGTGCCCGATGGCGTGGAGTACACAGAGGAGGAGCGCGTCC
AGTTGGCCGAACGGAAGCAGAGCATCCAACACAATGCCACCAGGCTGCCC
GATGAGGCAAAGCATCGCGAAATGGACACTAAAAAGCTGAATGATGAAGT
GCCCCAAAATGGGGCTGGTGGTGCCACAGCTACTCCGAAGGTACGCGGCT
TCGATTTGTTGCGTTCACCATCACCGCGACCCGGAGAGGCTTTCTCGCCC
ATAATGACCTGGGGTGAGATCGATGGCACTCCCTTTCGCCTGGACGGAGG
CGATACCCCATTGCGGCCCACACAAGGACCCTCGTTCCGGATTAATGAGA
ACTCTCGGCGCGAAAACATCGCCATCGCTTTGGCCGAAAGGGTCAGCGAA
AGGATGCGAAATCAAAAACAAATGGCTCTGGATACGGCGCGTCGTAACAT
TGGCTCACCACTGATACGCACCAATATGGAACGGCTGGCCAGCATGTCGC
CGGCAGCGCAGCTACTGGCCACGGGTAAGCTGGGTATCCGCGGCACGCCC
CGATTAAGGCACACACCATCGCCGATGAGCGGCAGAAAACGAAAGGTTAC
GCCCGGCGTGGTGAGGAGCACCAATACGCCAATACTGGGTGAACCCAAAC
CCAAACAGCAGGCCAAGATTAGCACTCCGGCTAAGAACGTTACCATTGAT
ACGGGATCCACGCTCACGGACGATCTGCTCAAGATACCCACTAAACGACG
CACTGCAGCCGATTTCTTTGCAAGCTTTCTAGACCAT
BO28575.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:59:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Es2-RA | 1506 | CG1474-PA | 1..1503 | 17..1519 | 7515 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:59:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Es2-RA | 1729 | CG1474-RA | 93..1595 | 17..1519 | 7515 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:59:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 8462064..8463215 | 368..1519 | 5760 | 100 | Plus |
X | 23542271 | X | 8461571..8461922 | 17..368 | 1760 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:59:52 has no hits.
BO28575.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-13 12:52:54 Download gff for
BO28575.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Es2-RA | 96..1598 | 17..1521 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:15:18 Download gff for
BO28575.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Es2-RA | 93..1595 | 17..1521 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:32:43 Download gff for
BO28575.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Es2-RA | 93..1595 | 17..1521 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:32:43 Download gff for
BO28575.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 8461571..8461922 | 17..368 | 100 | -> | Plus |
X | 8462065..8463215 | 369..1521 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:15:18 Download gff for
BO28575.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 8355604..8355955 | 17..368 | 100 | -> | Plus |
arm_X | 8356098..8357248 | 369..1521 | 99 | | Plus |
BO28575.pep Sequence
Translation from 16 to 1537
> BO28575.pep
MSATTRTPATPGTPGTPGSLAMEVARVQNSALAEFKKPTAMVRHKNKPKI
LTEEKYIEEMSKIIQRDFFPDLERLRAQNDYLDAESRRDFVQMAEIRERY
SLGRISGTGRSTSRRNNAMSPATFETPVSQAKCSNTPLPNSRATDTPFST
DGSEKSDAEGRDTTAKLSLDAFLQKYTSEDNQSFQEIIETAEAKLRQKYA
VLYNHEKLSAEQLQRALMLPSIETQFEEPDPLRKIETWNYTNMNSIMYVP
DGVEYTEEERVQLAERKQSIQHNATRLPDEAKHREMDTKKLNDEVPQNGA
GGATATPKVRGFDLLRSPSPRPGEAFSPIMTWGEIDGTPFRLDGGDTPLR
PTQGPSFRINENSRRENIAIALAERVSERMRNQKQMALDTARRNIGSPLI
RTNMERLASMSPAAQLLATGKLGIRGTPRLRHTPSPMSGRKRKVTPGVVR
STNTPILGEPKPKQQAKISTPAKNVTIDTGSTLTDDLLKIPTKRRTAADF
FASFLDH
BO28575.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:57:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Es2-PA | 501 | CG1474-PA | 1..501 | 1..501 | 2564 | 100 | Plus |