BO28582.complete Sequence
2509 bp assembled on 2011-08-04
GenBank Submission: KX798081
> BO28582.complete
GAAGTTATCAGTCGACATGAATTCGCGACGGATTGCTCTGGTCCTCCTAA
TCGGCATAATCGTTTCGTTTTCTGGCCATGATGCACTAACCTATCCGGAG
CGCTTCGATCGCCTGCCCACTTGGGGTGGTCATTCCCAAATTGGTGGGCC
GCTGCTGGATACCGCCCACCGGGAGAATCGTGAGAAAAGGGAGAATAGGG
TGGACCTGTGCCGGCACTGTTTCTGCATTCATCTCAAGGCAATCTGTGAT
TACAAGCTTAACAAAACGCTCCCGAACGAATTTAACGATAAACTATTGGT
GCCGCTGAACATCAAATATATTGAGGTGCGACTGACTGTTGGCACCCAGT
TCGTGATGTACGAGAACTTCTTCCAGGACAACCAGGTGAACTACTTTGGT
GTAATCGGAGTGGGGAAAGATGACCAGGTGGAAATAACCAGCAATGCATT
TAGCCACAACAAAGGCGGTTTTCCCAACATCGAAATACGAAATGTATTGC
GAGTTTTTCTGCGTGAGAAATTCCTGACCGGTGCGGACTACAAGCTGCTG
GTGGAGGATGTTACTCAGCTGTCCGTATTCTCCAATGCCCTTCAGATGAC
TAATCTAGACTGTTCTCTCAAGCGGATCAAGGAGCTGAATCTGATGAAGA
ACGCTTTCAATCCTGGGGTTGCCAAATATGGAATAAATCTCCGCATCGAG
GATTCGAACATCAATCAGCTGGGTATATTCGGCGTGTCCATGGGCAAGGT
GAGCCTGTTGCGCTGCCACATCGACATGATCATGAGCAACGCCTTTGACG
TTACCAGCATCAAGGAGCTGATTATCGAGGGCTGCAATATCGAGGTGATC
GAGAGCCAGGCGCTAACCAACAAATTGCATAGCGATAAGGTGGCCATCGT
GGATACGGTGATCGGTACGATTGAGGGTCAGGCGATCAGTCAGAGCGGTA
TAACTACCATGATTATGTTTGGAAATACAATTACAAAAATACGTTCGAAT
GCCATTCAAATTGTTGCCGTTAGTCTGTTCATACGCAACAATTCAATGAG
CCATGTGGAGCCCAATTGGTTGAGTGTCAGCCAGGCCGATCAAGTGGAGA
TTGCGAATAATCGCTTCGAGGACTACGGACGCTGTGAACTGAACATTGGC
TCCTCGAACTGCAGTTTTCGCAACAATATACTGCAGAATCCGCAATCGGG
TAGCCTCAATTTTACATGTCGCGTCCACCAGGTGCGCGTGGGCACCGAGT
GCTCGTGCAACAAGTCCTGGCTATCGGAGCTAACCGATCATGATCTGGAA
TCGGAAATCATGTGTCAGGTGGCAAAGCGTGATGCCAACTGCTTTAATGC
CACCAATACGGATGTCCGCCGGTATGTCAACGAGGCATGTGGCAGCAATG
TGACCCGCTACTGTATGGGTGGCCAGTGGGTGACCAAGGCGGTCAGTGAT
CATTCTAGCGACTCCAGCAAATTGACCATCGGAATGATAGCCCTTGAGAT
TGTGATTTTAACACTCTTGCTTGTTGCGATTGTCTGTGTGTTGGCCAAAA
ACTGTGGCAGTGGAAGCTGCGCTCCTGCCGGTGGCCAGTCCACTGATAAT
TGCCTAATCGAGGAGGACATTCGCAACTCACTGCGCCAGCTCGCACTGCA
CAGCGAGAGCAATAAGACACGCAAGGCTATACTGAAGCTGATCAATGGTC
ATTTGAGCAAGGGGGAGTGCAACGATCGGATACTCTTTATAGTGGACAAC
ATGCCGCAAAATCAGGCGATCGAAAGCCTGCTGTTTAGGCACATATCGCA
GAGTCACATGGAGCCCAGTGATAGTGAGGCATATGCCAGCACCGCCTTAA
CAGCCAATGCAACAGCACCACCACTGCCGCCCAGTACCGATTCCAGTGAG
CCCATCTACCAAGAGCTCGACCAGCAACGACTGATCATCGACGACAAGTA
CTCATTGCCGCTGAATTCCGACGAGGATCCGCCGTACTCGGAGCCGTCCA
ATATGATGAATACGAACGACATGCCACCGGCATATCAATATGCCACACCG
ATGCGCATCCTGCCATGCCACCAGATGCAGCATCAGCAGCCGTCGACGAC
GGCCAATTATGCCATCCCCGTTTGGAGGTCCACTCCAAGTGCCACGCCCA
CTAGCCGCCCACCCTCGGGCTCACAGGAGGGGTCGGCCACCGCCACAGCG
CCCAGAGCTGTCAAGGATTTGCGGCAGGCTCTGCAGAACTCCCCACAGTT
CCATCCCAACCAGCTGACCTCAACGCGCAACCAAAGACAAATCCTGCAGA
TTCTGCCGCCGCTTCAGCCGCCGCCGTACACTCAGAGGTCACAGGTCAGG
GGTCAGCGGAGGCGCAGCTTCGAGTGCCTCGATGGCGCCGCCAGCTTGGC
GGCCATGGAGCACATGGACTCCGGCTCGGATCACTCTGGCGGCAGTGATG
TGACCGTCCAAATTGCTGATGTGATCGACTACGCGGATGCCGCAAGCTTT
CTAGACCAT
BO28582.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:07:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| be-RF | 2478 | CG32594-PF | 1..2475 | 17..2491 | 12375 | 100 | Plus |
| be-RC | 2478 | CG32594-PC | 1..2475 | 17..2491 | 12375 | 100 | Plus |
| be-RB | 2103 | CG32594-PB | 1..1993 | 17..2009 | 9965 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:07:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| be-RF | 3069 | CG32594-RF | 268..2742 | 17..2491 | 12375 | 100 | Plus |
| be-RC | 3240 | CG32594-RC | 268..2742 | 17..2491 | 12375 | 100 | Plus |
| be-RB | 4014 | CG32594-RB | 268..2260 | 17..2009 | 9965 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:07:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15031543..15032573 | 979..2009 | 5155 | 100 | Plus |
| X | 23542271 | X | 15033606..15034087 | 2010..2491 | 2410 | 100 | Plus |
| X | 23542271 | X | 15031178..15031467 | 689..978 | 1450 | 100 | Plus |
| X | 23542271 | X | 15030585..15030849 | 268..532 | 1325 | 100 | Plus |
| X | 23542271 | X | 15024703..15024954 | 17..268 | 1260 | 100 | Plus |
| X | 23542271 | X | 15030910..15031068 | 530..688 | 795 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:07:25 has no hits.
BO28582.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-04 17:43:41 Download gff for
BO28582.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| be-RC | 270..2744 | 17..2493 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:45:36 Download gff for
BO28582.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| be-RC | 268..2742 | 17..2493 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:19:00 Download gff for
BO28582.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| be-RC | 268..2742 | 17..2493 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:19:00 Download gff for
BO28582.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15030911..15031068 | 531..688 | 100 | -> | Plus |
| X | 15030586..15030847 | 269..530 | 100 | -> | Plus |
| X | 15031543..15032573 | 979..2009 | 100 | -> | Plus |
| X | 15024703..15024954 | 17..268 | 100 | -> | Plus |
| X | 15031178..15031467 | 689..978 | 100 | -> | Plus |
| X | 15033606..15034087 | 2010..2493 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:45:36 Download gff for
BO28582.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14925211..14925500 | 689..978 | 100 | -> | Plus |
| arm_X | 14925576..14926606 | 979..2009 | 100 | -> | Plus |
| arm_X | 14918736..14918987 | 17..268 | 100 | -> | Plus |
| arm_X | 14924619..14924880 | 269..530 | 100 | -> | Plus |
| arm_X | 14924944..14925101 | 531..688 | 100 | -> | Plus |
| arm_X | 14927639..14928120 | 2010..2493 | 99 | | Plus |
BO28582.pep Sequence
Translation from 16 to 2509
> BO28582.pep
MNSRRIALVLLIGIIVSFSGHDALTYPERFDRLPTWGGHSQIGGPLLDTA
HRENREKRENRVDLCRHCFCIHLKAICDYKLNKTLPNEFNDKLLVPLNIK
YIEVRLTVGTQFVMYENFFQDNQVNYFGVIGVGKDDQVEITSNAFSHNKG
GFPNIEIRNVLRVFLREKFLTGADYKLLVEDVTQLSVFSNALQMTNLDCS
LKRIKELNLMKNAFNPGVAKYGINLRIEDSNINQLGIFGVSMGKVSLLRC
HIDMIMSNAFDVTSIKELIIEGCNIEVIESQALTNKLHSDKVAIVDTVIG
TIEGQAISQSGITTMIMFGNTITKIRSNAIQIVAVSLFIRNNSMSHVEPN
WLSVSQADQVEIANNRFEDYGRCELNIGSSNCSFRNNILQNPQSGSLNFT
CRVHQVRVGTECSCNKSWLSELTDHDLESEIMCQVAKRDANCFNATNTDV
RRYVNEACGSNVTRYCMGGQWVTKAVSDHSSDSSKLTIGMIALEIVILTL
LLVAIVCVLAKNCGSGSCAPAGGQSTDNCLIEEDIRNSLRQLALHSESNK
TRKAILKLINGHLSKGECNDRILFIVDNMPQNQAIESLLFRHISQSHMEP
SDSEAYASTALTANATAPPLPPSTDSSEPIYQELDQQRLIIDDKYSLPLN
SDEDPPYSEPSNMMNTNDMPPAYQYATPMRILPCHQMQHQQPSTTANYAI
PVWRSTPSATPTSRPPSGSQEGSATATAPRAVKDLRQALQNSPQFHPNQL
TSTRNQRQILQILPPLQPPPYTQRSQVRGQRRRSFECLDGAASLAAMEHM
DSGSDHSGGSDVTVQIADVIDYADAASFLDH
BO28582.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:14:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| be-PF | 825 | CG32594-PF | 1..825 | 1..825 | 4290 | 100 | Plus |
| be-PC | 825 | CG32594-PC | 1..825 | 1..825 | 4290 | 100 | Plus |
| be-PB | 700 | CG32594-PB | 1..665 | 1..665 | 3441 | 99.8 | Plus |
