BO28592.complete Sequence
520 bp assembled on 2011-07-13
GenBank Submission: KX799581
> BO28592.complete
GAAGTTATCAGTCGACATGACTAGCTTTCGGGAAATGCGTTTCGATGATT
TGTTCAAAATTAATTCACTAGTTTTCGATGCTCTCACCGAGGTTTATAGC
CTGACCTTTTTTGTAAAGCATTTTTTGGAGTTTCCAGGACTCTCACAGAT
TGCCATAGCTCCAGGTCCTGATGGCAGACCCATGGGATATATATTCGGGC
AGTATCAGGTCAAGCGCAACCAGGATCCCTATGGTCATGTGGCAGCATTG
ACTGTATCTCCGGAGTACCGACGCCTTGGACTGGCCACTGCTCTAATGGA
TTTTTTCTTTATGGTCTCAGACCTTAAAGGAGCTTCCTATGTTAACCTCT
TTATGCGAATCAGTAATCGGGCTGCCTATCAATTGTACACTTCTTTGGGT
TATGCTCATCGCCAAACATTCCTGGACTACTATCCGGATGAACCGAAGCC
AGAAAGTGCCTACGAATTGAGAAAGTACGTTCCCCGCCCCATGGAGGTTC
AAGCAAGCTTTCTAGACCAT
BO28592.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:53:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31730-RA | 489 | CG31730-PA | 1..486 | 17..502 | 2430 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:53:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31730-RA | 680 | CG31730-RA | 109..594 | 17..502 | 2430 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:53:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13259150..13259635 | 502..17 | 2430 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:53:39 has no hits.
BO28592.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-13 10:17:16 Download gff for
BO28592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31730-RA | 7..492 | 17..504 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:12:28 Download gff for
BO28592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31730-RA | 7..492 | 17..504 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:29:59 Download gff for
BO28592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31730-RA | 109..594 | 17..504 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:29:59 Download gff for
BO28592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13259147..13259635 | 17..504 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:12:28 Download gff for
BO28592.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13259147..13259635 | 17..504 | 99 | | Minus |
BO28592.pep Sequence
Translation from 16 to 520
> BO28592.pep
MTSFREMRFDDLFKINSLVFDALTEVYSLTFFVKHFLEFPGLSQIAIAPG
PDGRPMGYIFGQYQVKRNQDPYGHVAALTVSPEYRRLGLATALMDFFFMV
SDLKGASYVNLFMRISNRAAYQLYTSLGYAHRQTFLDYYPDEPKPESAYE
LRKYVPRPMEVQASFLDH
BO28592.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:56:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31730-PA | 162 | CG31730-PA | 1..162 | 1..162 | 850 | 100 | Plus |
| NAA20-PD | 175 | CG14222-PD | 1..153 | 1..157 | 327 | 45.2 | Plus |
| NAA20-PC | 175 | CG14222-PC | 1..153 | 1..157 | 327 | 45.2 | Plus |
| NAA20-PA | 175 | CG14222-PA | 1..153 | 1..157 | 327 | 45.2 | Plus |
| NAA20-PB | 180 | CG14222-PB | 1..153 | 1..157 | 327 | 45.2 | Plus |
