BO28595.complete Sequence
583 bp assembled on 2011-07-13
GenBank Submission: KX797188
> BO28595.complete
GAAGTTATCAGTCGACATGTGGAAGAGCCTGGGACTCGGTTGCGGTCTAC
TTTCTCTTGGCGCCTTCATCTCCTGCTTTGTGGCGCTGCACATGCTCAAC
CAGATTATTCACATCGAACTGGACGCCTCCGTTGACGTGACCATGCAATT
GGAGGCCGACAAAGATTTGGACGTACGCTGCCATGGCACCCTGATCGTTG
GCAATCCGGATGCAGCGCATCTTAGCCGGCAGGAGTTATCGTATTTGCGC
TGGACGGTGGTGTTCACGCTGCTCTACTCCTTCGCGACCACGCTCCTCAT
CCGGGCCAAGTACTTGGGCAATTTTGAGATTAGCCTGGCCACCTCCAATG
CGATGATGCTGATGGGATCCCTGCTATCGGTGCTTCTGGTTATGGTCACC
GTTGCTCTCCATCAGCATGAACCATTCCCGGATCTGCGGTGCAACCAGTT
GGTTGTCTACCACTTGTACTACATCGCCCTGAACACCGCCATCTCAGTGG
TGTTCTTCCTGGTCCATTCCATTCAGGAGCTGCTGCTGCATCGTTTACAG
CCGACATTGAAGTACGCAAGCTTTCTAGACCAT
BO28595.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:53:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32712-RB | 552 | CG32712-PB | 1..549 | 17..565 | 2745 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:53:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32712-RB | 600 | CG32712-RB | 16..564 | 17..565 | 2745 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:53:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8433389..8433673 | 352..68 | 1425 | 100 | Minus |
| X | 23542271 | X | 8433123..8433336 | 565..352 | 1070 | 100 | Minus |
| X | 23542271 | X | 8433744..8433794 | 67..17 | 255 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:53:12 has no hits.
BO28595.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-13 10:17:15 Download gff for
BO28595.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32712-RB | 16..564 | 17..567 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:12:16 Download gff for
BO28595.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32712-RB | 16..564 | 17..567 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:29:45 Download gff for
BO28595.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32712-RB | 16..564 | 17..567 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:29:45 Download gff for
BO28595.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8433121..8433335 | 353..567 | 99 | <- | Minus |
| X | 8433389..8433673 | 68..352 | 100 | <- | Minus |
| X | 8433744..8433794 | 17..67 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:12:16 Download gff for
BO28595.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8327154..8327368 | 353..567 | 99 | <- | Minus |
| arm_X | 8327422..8327706 | 68..352 | 100 | <- | Minus |
| arm_X | 8327777..8327827 | 17..67 | 100 | | Minus |
BO28595.pep Sequence
Translation from 16 to 583
> BO28595.pep
MWKSLGLGCGLLSLGAFISCFVALHMLNQIIHIELDASVDVTMQLEADKD
LDVRCHGTLIVGNPDAAHLSRQELSYLRWTVVFTLLYSFATTLLIRAKYL
GNFEISLATSNAMMLMGSLLSVLLVMVTVALHQHEPFPDLRCNQLVVYHL
YYIALNTAISVVFFLVHSIQELLLHRLQPTLKYASFLDH
BO28595.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:56:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32712-PB | 183 | CG32712-PB | 1..183 | 1..183 | 933 | 100 | Plus |
