BO28605.complete Sequence
547 bp assembled on 2011-07-13
> BO28605.complete
GAAGTTATCAGTCGACATGTTAAAGTTTCTTTGGCTTTTACCCATTGTCA
CTATCGCTATACCTAAAATTACCCACGCTCAAAGGCCGTCTTTTGCTGGC
ATAAGACCTCCAGGCGGACTTACTCAGAAGGACAAGTACGCCCAAACTAA
AAATACAGCCCTGGAGAACTTTAATGGAGTTTCGGGACCCAAGGATACTA
CGCAAAAGAAAATTATCAACCTTCCTTATGGAGCACCGCAAAGGCCGCCA
ATGGGAGTTCCGCTGGTTCATCCCTCCGCTCCGGAGGAGTTGTTAGCCTC
GTACAGCCCCGTCAACAACGCTGCTGGATTTCCAGCTCAAACTGCCCCAG
ATAACAGCCGACTTCCCATCGATGCCCGAGGTGACAGGGACTGGGTGAAT
AGATTGAAGCAGCTGCCCGTGGACCAGCAGCCCTTCTGGCTTGTGAACTA
TCAAGCAATCGAAGCAATGAGGAACAATCCCAGACCCAATGTTGGAAATT
ATGAATGGCGTGGGAATTCGTTCGGCGGTGCAAGTATTCTAGACCAT
BO28605.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:54:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33290-RA | 516 | CG33290-PA | 1..513 | 17..529 | 2565 | 100 | Plus |
| CG14567-RA | 573 | CG14567-PA | 406..480 | 365..439 | 180 | 82.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:54:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33290-RA | 654 | CG33290-RA | 69..583 | 15..529 | 2575 | 100 | Plus |
| CG14567-RA | 725 | CG14567-RA | 502..576 | 365..439 | 180 | 82.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:54:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 21542427..21542941 | 15..529 | 2575 | 100 | Plus |
| 3L | 28110227 | 3L | 21736290..21736350 | 464..404 | 185 | 86.9 | Minus |
| 3L | 28110227 | 3L | 21737855..21737929 | 439..365 | 180 | 82.7 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:54:35 has no hits.
BO28605.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-13 10:17:18 Download gff for
BO28605.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33290-RA | 76..583 | 22..531 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:12:53 Download gff for
BO28605.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33290-RA | 76..583 | 22..531 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:30:22 Download gff for
BO28605.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33290-RA | 76..583 | 22..531 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:30:22 Download gff for
BO28605.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 21542434..21542941 | 22..531 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:12:53 Download gff for
BO28605.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 21535534..21536041 | 22..531 | 99 | | Plus |
BO28605.pep Sequence
Translation from 16 to 547
> BO28605.pep
MLKFLWLLPIVTIAIPKITHAQRPSFAGIRPPGGLTQKDKYAQTKNTALE
NFNGVSGPKDTTQKKIINLPYGAPQRPPMGVPLVHPSAPEELLASYSPVN
NAAGFPAQTAPDNSRLPIDARGDRDWVNRLKQLPVDQQPFWLVNYQAIEA
MRNNPRPNVGNYEWRGNSFGGASILDH
BO28605.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:56:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33290-PA | 171 | CG33290-PA | 1..171 | 1..171 | 923 | 100 | Plus |
| CG14567-PA | 190 | CG14567-PA | 1..190 | 5..171 | 433 | 47.4 | Plus |
