BO28614.complete Sequence
746 bp assembled on 2011-07-13
GenBank Submission: KX799239
> BO28614.complete
GGAAGTTATCAGTCGACATGAAGGCAGCAATAATTTTGGCACTAATCGGT
ACAGTTTTGACGGCTCCGCCAGTCAGGGTGATGCCGAAACCAGGCAGTGA
GCTTGATCAGTACGCTCACATATTTGCAAAGGTACGACCACCGGGCCAGA
AGCACCAGAACATGGAGATTGAATTCCAGCCACAGCACCACAACTCTCTG
CCGAGCAACCAGGTCAATGCGGAAATCAATCATGTGGAGCCCAAGCAGCC
TCAGTACATGGAACAAAGTTCTTCTCAGGTCGAGTCGAGACCTCCTCACA
CCGTGGACTTTGAGATCAAGCCGGTGGAGCAGAAGCCACCCCAGCGATTG
GAGTTTGAGGTGAAGCCGCAGCACGAGCAAAACTCTCCTCAGGGACATTT
GGTTTCTTTGGGCGTCAAGCCCGTGGAGCAGAAGCCACCTCAGCACTTGG
AGGTGGAGATTAAGCAGCAGCAGCAACAACATTCTTCGCAAAATCATCAG
GTGGAACTGGAAATCAAGCAGGTGGAACAGAAGCCTCCACAGCACTTGGA
AATTGAGATCAAGCCTGTTGACCAGAAGCCACCGCACCGTGTGGAGCTTG
AAGTCCAACAGCAGCATCACCAAAACTCTGCCCAGGGACACTTGGTTTCT
TTGGGAGCAGTGGAACAGAAGCAACAACACATCGATCATGAGCTGAAGAA
TTCCCATAAAATCGAGCTAGAATTTGTTGCAAGCTTTCTAGACCAT
BO28614.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:54:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12934-RB | 714 | CG12934-PB | 1..711 | 18..728 | 3555 | 100 | Plus |
| CG12934-RA | 714 | CG12934-PA | 1..711 | 18..728 | 3555 | 100 | Plus |
| CG12934-RB | 714 | CG12934-PB | 293..395 | 553..655 | 230 | 81.6 | Plus |
| CG12934-RB | 714 | CG12934-PB | 536..638 | 310..412 | 230 | 81.6 | Plus |
| CG12934-RA | 714 | CG12934-PA | 293..395 | 553..655 | 230 | 81.6 | Plus |
| CG12934-RA | 714 | CG12934-PA | 536..638 | 310..412 | 230 | 81.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:54:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12934-RB | 943 | CG12934-RB | 25..735 | 18..728 | 3555 | 100 | Plus |
| CG12934-RA | 858 | CG12934-RA | 25..735 | 18..728 | 3555 | 100 | Plus |
| CG12934-RB | 943 | CG12934-RB | 317..419 | 553..655 | 230 | 81.6 | Plus |
| CG12934-RB | 943 | CG12934-RB | 560..662 | 310..412 | 230 | 81.6 | Plus |
| CG12934-RA | 858 | CG12934-RA | 317..419 | 553..655 | 230 | 81.6 | Plus |
| CG12934-RA | 858 | CG12934-RA | 560..662 | 310..412 | 230 | 81.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:54:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 10648912..10649622 | 18..728 | 3555 | 100 | Plus |
| 2R | 25286936 | 2R | 10649204..10649306 | 553..655 | 230 | 81.6 | Plus |
| 2R | 25286936 | 2R | 10649447..10649549 | 310..412 | 230 | 81.6 | Plus |
Blast to na_te.dros performed 2014-11-26 16:54:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6810..6996 | 427..619 | 177 | 56.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6732..6888 | 463..625 | 162 | 57.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2353..2509 | 463..622 | 161 | 59.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2347..2559 | 427..643 | 156 | 55 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6934 | 427..641 | 149 | 53.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6739..6858 | 425..544 | 133 | 59.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6798..6946 | 427..581 | 131 | 56.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6760..6876 | 425..544 | 125 | 61 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2594..2684 | 425..517 | 118 | 61.7 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1065..1143 | 463..544 | 115 | 62.2 | Plus |
BO28614.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-13 10:17:19 Download gff for
BO28614.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12934-RA | 29..740 | 17..730 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:13:01 Download gff for
BO28614.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12934-RA | 24..735 | 17..730 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:30:29 Download gff for
BO28614.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12934-RA | 24..735 | 17..730 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:30:29 Download gff for
BO28614.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 10648911..10649622 | 17..730 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:13:01 Download gff for
BO28614.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 6536416..6537127 | 17..730 | 99 | | Plus |
BO28614.pep Sequence
Translation from 17 to 746
> BO28614.pep
MKAAIILALIGTVLTAPPVRVMPKPGSELDQYAHIFAKVRPPGQKHQNME
IEFQPQHHNSLPSNQVNAEINHVEPKQPQYMEQSSSQVESRPPHTVDFEI
KPVEQKPPQRLEFEVKPQHEQNSPQGHLVSLGVKPVEQKPPQHLEVEIKQ
QQQQHSSQNHQVELEIKQVEQKPPQHLEIEIKPVDQKPPHRVELEVQQQH
HQNSAQGHLVSLGAVEQKQQHIDHELKNSHKIELEFVASFLDH
BO28614.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:56:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12934-PB | 237 | CG12934-PB | 1..237 | 1..237 | 1247 | 100 | Plus |
| CG12934-PA | 237 | CG12934-PA | 1..237 | 1..237 | 1247 | 100 | Plus |
