BO28616.complete Sequence
802 bp assembled on 2011-07-13
GenBank Submission: KX799841
> BO28616.complete
GAAGTTATCAGTCGACATGAAGTTGGTCTGGATGTTGATGTCCTTGCAGC
TAATGCTTTTGGCAACTGCTCTTAGTGCCAGGCAATGTGTCAAGCCAACT
GCTTCACCAAAGCCCCCTGAGGATCCTGACGACCCCACTGATGATCCCTG
GGATCCCACAGATGACTCATCGGAGGACCCATCCGATTCGACCGATGAAC
CATGGAAGCCCACTGCTAAGCCCACAGTAGTACCAACTGAACCGCCCTCG
AACATTACATCTACTGAAAATCCATCGGAGCCAACTGAAAATCCATTGAA
TCCCACGGGAAGTCCCACCAACGACGAACCATCGGAGCCAACCGAAGAAT
CCACTGAAAATCCATCGGATCCCACAGGACAGCCCACTGGAGAAACGTCT
AATCCATCAGATCAACCCACTGACAGTCCCACAGGTCAACCGACTCAAGA
AACAACTGAAGAGACTAAAATACCGGCGGGGGAAACCACCAATGAAGGTA
CTTCGGATTCCACTGAAGAGCCCACTGGAGAACCATCAATTCCCACGCAT
GAGCCAGAAGAATCCTCGGGCGATCCATCAGATCCGACAAGTGCGACCAC
CCAGACAATTCCCAACGTGGATGCGAACGCCTCCTGTAGAGCTCATCAAG
GTGTGCAATTTCTGCCACATCCGTACGATTGTCATTTATACATACATTGC
GATGGAGATATTGGATTCATCAAGGATTGTCCAAGTGATCTGTACTGGAA
CTCGGTAAACCAGACTTGCGACAAGACCTGTGCCGCAAGCTTTCTAGACC
AT
BO28616.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:56:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14125-RA | 771 | CG14125-PA | 1..768 | 17..784 | 3840 | 100 | Plus |
| CG14125-RB | 792 | CG14125-PB | 29..789 | 24..784 | 3805 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:56:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14125-RA | 839 | CG14125-RA | 18..785 | 17..784 | 3840 | 100 | Plus |
| CG14125-RB | 860 | CG14125-RB | 46..806 | 24..784 | 3805 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:56:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11974996..11975756 | 24..784 | 3805 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:56:56 has no hits.
BO28616.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-13 12:35:29 Download gff for
BO28616.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14125-RA | 18..785 | 17..786 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:13:51 Download gff for
BO28616.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14125-RA | 18..785 | 17..786 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:31:21 Download gff for
BO28616.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14125-RA | 18..785 | 17..786 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:31:21 Download gff for
BO28616.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11974990..11975756 | 17..786 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:13:51 Download gff for
BO28616.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11968090..11968856 | 17..786 | 99 | | Plus |
BO28616.pep Sequence
Translation from 16 to 802
> BO28616.pep
MKLVWMLMSLQLMLLATALSARQCVKPTASPKPPEDPDDPTDDPWDPTDD
SSEDPSDSTDEPWKPTAKPTVVPTEPPSNITSTENPSEPTENPLNPTGSP
TNDEPSEPTEESTENPSDPTGQPTGETSNPSDQPTDSPTGQPTQETTEET
KIPAGETTNEGTSDSTEEPTGEPSIPTHEPEESSGDPSDPTSATTQTIPN
VDANASCRAHQGVQFLPHPYDCHLYIHCDGDIGFIKDCPSDLYWNSVNQT
CDKTCAASFLDH
BO28616.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:56:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14125-PA | 256 | CG14125-PA | 1..256 | 1..256 | 1420 | 100 | Plus |
| CG14125-PB | 263 | CG14125-PB | 8..263 | 1..256 | 1408 | 98.8 | Plus |
| Muc68E-PA | 1799 | CG33265-PA | 1422..1678 | 28..261 | 220 | 28.1 | Plus |
| Mur89F-PC | 2158 | CG4090-PC | 1616..1855 | 32..252 | 214 | 32.4 | Plus |
| Mur89F-PB | 2159 | CG4090-PB | 1616..1855 | 32..252 | 214 | 32.4 | Plus |
