BO28668.complete Sequence
1141 bp assembled on 2011-07-13
GenBank Submission: KX797890
> BO28668.complete
GAAGTTATCAGTCGACATGGCTTTCGCCGGACTCAAAAAGCAGATCAACA
AGGCCAACCAGTATATGACGGAGAAGATGGGCGGTGCCGAGGGCACCAAA
CTGGACATGGACTTCATGGAGATGGAACGCAAGACGGACGTCACCGTGGA
GCTAGTGGAGGAGCTGCAGCTAAAGACGAAGGAGTTCCTGCAGCCGAATC
CAACGGCACGGGCCAAAATGGCAGCGGTCAAGGGCATCTCGAAGCTGTCC
GGACAGGCCAAGTCCAATACGTATCCGCAACCGGAGGGCCTGCTCGCGGA
ATGCATGCTGACTTATGGGAAGAAGCTCGGCGAGGACAACAGCGTGTTCG
CGCAGGCGCTCGTCGAATTCGGCGAAGCGCTGAAACAGATGGCCGACGTC
AAGTATTCGCTGGACGACAACATCAAGCAGAACTTTTTGGAGCCACTGCA
TCATATGCAGACCAAAGACCTCAAGGAGGTAATGCATCATCGCAAGAAGC
TGCAGGGCCGGCGGCTAGACTTTGACTGCAAGCGTCGCCGACAGGCCAAG
GACGATGAGATTCGTGGTGCCGAGGACAAGTTCGGTGAATCGCTCCAGCT
GGCCCAGGTGGGCATGTTCAATTTGCTCGAGAACGATACGGAGCATGTCT
CCCAGCTGGTCACCTTTGCCGAGGCACTATACGATTTTCATTCGCAATGC
GCGGATGTCCTTCGAGGCCTGCAGGAGACACTGCAGGAGAAGCGCTCCGA
GGCGGAGAGCCGGCCACGCAACGAGTTCGTGCCCAAGACGCTGCTCGATC
TGAACTTGGACGGCGGTGGCGGCGGCCTCAACGAAGATGGCACGCCGTCT
CACATTAGTTCGAGCGCCTCGCCGTTGCCCTCGCCGATGCGTTCGCCCGC
CAAGTCGATGGCCGTAACGCCGCAGCGCCAGCAGCAGCCCTGCTGCCAGG
CCCTCTACGACTTCGAGCCGGAGAATCCCGGCGAACTGGCCTTCAAGGAG
AACGACATTATCACCCTGTTGAATCGCGTCGACGACAATTGGTTCGAGGG
CGCGGTGAATGGCCGCACCGGTTACTTCCCGCAGTCGTATGTTCAGGTGC
AGGTGCCCCTGCCCAATGGCAACGCAAGCTTTCTAGACCAT
BO28668.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:55:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
EndoA-RC | 1110 | CG14296-PC | 1..1107 | 17..1123 | 5535 | 100 | Plus |
EndoA-RB | 1110 | CG14296-PB | 1..1107 | 17..1123 | 5535 | 100 | Plus |
EndoA-RA | 1110 | CG14296-PA | 1..1107 | 17..1123 | 5535 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:55:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
EndoA-RC | 3913 | CG14296-RC | 479..1586 | 16..1123 | 5540 | 100 | Plus |
EndoA-RB | 3740 | CG14296-RB | 658..1765 | 16..1123 | 5540 | 100 | Plus |
EndoA-RA | 3561 | CG14296-RA | 479..1586 | 16..1123 | 5540 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:55:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 18907266..18908373 | 16..1123 | 5540 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:55:23 has no hits.
BO28668.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-13 10:17:21 Download gff for
BO28668.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
endoA-RB | 658..1764 | 17..1125 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:13:13 Download gff for
BO28668.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
endoA-RA | 480..1586 | 17..1125 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:30:40 Download gff for
BO28668.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
EndoA-RA | 480..1586 | 17..1125 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:30:40 Download gff for
BO28668.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 18907267..18908373 | 17..1125 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:13:13 Download gff for
BO28668.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 14732989..14734095 | 17..1125 | 99 | | Plus |
BO28668.pep Sequence
Translation from 16 to 1141
> BO28668.pep
MAFAGLKKQINKANQYMTEKMGGAEGTKLDMDFMEMERKTDVTVELVEEL
QLKTKEFLQPNPTARAKMAAVKGISKLSGQAKSNTYPQPEGLLAECMLTY
GKKLGEDNSVFAQALVEFGEALKQMADVKYSLDDNIKQNFLEPLHHMQTK
DLKEVMHHRKKLQGRRLDFDCKRRRQAKDDEIRGAEDKFGESLQLAQVGM
FNLLENDTEHVSQLVTFAEALYDFHSQCADVLRGLQETLQEKRSEAESRP
RNEFVPKTLLDLNLDGGGGGLNEDGTPSHISSSASPLPSPMRSPAKSMAV
TPQRQQQPCCQALYDFEPENPGELAFKENDIITLLNRVDDNWFEGAVNGR
TGYFPQSYVQVQVPLPNGNASFLDH
BO28668.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:56:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
EndoA-PC | 369 | CG14296-PC | 1..369 | 1..369 | 1919 | 100 | Plus |
EndoA-PB | 369 | CG14296-PB | 1..369 | 1..369 | 1919 | 100 | Plus |
EndoA-PA | 369 | CG14296-PA | 1..369 | 1..369 | 1919 | 100 | Plus |
EndoB-PB | 378 | CG9834-PB | 21..369 | 10..361 | 234 | 23.6 | Plus |
EndoB-PA | 390 | CG9834-PA | 21..381 | 10..361 | 222 | 23.4 | Plus |