BO28671.complete Sequence
2347 bp assembled on 2011-09-19
GenBank Submission: KX798687
> BO28671.complete
GAAGTTATCAGTCGACATGGAGAAGGATCTGGGTGAGGAAAAGGACCAGG
ATCAGGAGCAGAACACTGAGATGGAGCCCAAGCAGGAGATGGACGTGGCG
CAGTCTTACATAACGCGGGCCAAGATGAATCCTGCCAAGAAGGATAACGA
GAAGCGACGACGCAAGGATGCCATGCGAAGGGTCTCGATGATACTGCGAA
AATGCGACTCCATGCGCACGACGGAAGATCGACAGTTTTTGGAGAAACAC
CCGGACATGGTGAAGACGACCAAGAAGCGCAAGGAGCGGGTAGAGATATA
CAAGGAGCGGGTTGTGGAACGCGAGGATGCGCCGCACGTGATCGAGGCGA
AGGTGGAGCAGTTGGCCAACATCATTTCGCAGGCTAAGCATCTAGTTTGC
TACACGGGAGCCGGTATAAGCACGGCAGCCCTGATTCCGGACTATCGCGG
TAGCCAGGGAATATGGACACTGCTCCAAAAGGGTCAGGACATCGGCGAGC
ATGATCTATCCAGCGCGAATCCCACCTACACGCACATGGCACTTTATGAG
CTGCATCGCCGCAGATTGCTGCATCATGTGGTCTCCCAGAATTGTGATGG
CCTGCACTTGCGATCCGGATTACCGAGAAATTCGTTGTCCGAAATCCATG
GAAACATGTACGTGGAGGTGTGCAAGAACTGTCGACCGAACAGCGTTTAC
TGGCGCCAGTTCGACACCACGGAGATGACTGCCCGCTATTGCCACAAGAC
CCACCGCCTATGCCATCGCTGCTCGGAGCCTTTGTACGACACCATTGTGC
ACTTCGGAGAGCGGGGGAACGTCAAGTGGCCATTGAACTGGGCGGGAGCC
ACTGCCAATGCGCAGCGAGCGGATGTGATTCTCTGCTTGGGCTCCAGTCT
CAAGGTACTCAAGAAGTACACTTGGCTTTGGCAGATGGACCGGCCTGCCC
GCCAGCGAGCAAAGATCTGTGTGGTCAACTTGCAGTGGACGCCCAAGGAT
GCGATTGCTAGCATAAAGATCAATGGGAAATGCGATCAGGTGATGGCCCA
ATTGATGCATCTACTCCACATTCCAGTTCCCGTTTACACGAAAGAGAAGG
ATCCGATTTTCGCACATGCTTCGCTTCTGATGCCCGAGGAACTGCACACG
CTTACACAACCATTGCTGAAGAATGCCGACGAGGAGGAGGCCTTCACCAC
TACCACTGAGGAAACGCAAGACTCGACTATCTCCAGCGAGAGCTGTAGCT
TTAACTACAGTGATCTTCCCATCGGCAAAGGACCCCGCATTCGCACACCC
ATCAAAAATGGTCGAAGAGTTAAGACTAACCTGGAGCTCCGACAGAAATT
CAAGACGCTCAATGGCCAGGACGAGGAAATTAAGGTGGAGCATGTGAAAA
CAAATGGGGAGGTTAAAACAGAGAAGGACTTAATCACGCTGGAGTCGTCC
ATTAAAATAGAGACTGAAGTTAAGCTGGAGAAATTAGAGTGCTCGGACAC
CAATTTTCAGCAGGAGTTGAAACTTTTGGAGCTGCTACCAAAGCTAGAAC
CACTTTCGCTCAAAGAAGAGACGGAGGAAACGCCGAGCAATGGTTTTCCA
GAGCTGCCAAAACTAGTCGCCATACAAAAAACTCATGCGGAATGTTTGTC
CGCGGTCCCAACTGAATCAAGACTAAAGCCGCTTCAGCTGCCACCGCTGG
TGCCCATTGGAGCACCACTGTCCACACCCTTTGTTGAGCCCAAATTGGTC
CTGCCACCTGCCTCTCAGTCGTCCAGCATACAGATAAAGAGCGAGGGCGA
TGGTGATTCCAGCACAGAGAACGATAACGAAGAGGAGGAGGAAAGCGAGC
TGGCCCAGATGGATTTGTTGAGGCAAAACAACGATGAGGAGCTGCTTCGC
CAATTACCCACGTGGTACGATGCCAAGTACGCGTATTCTGGTCTGCATAG
CATCCTGATCCCACCACCAGCGGATCTCAATATTTGGAACTCGCAGGTGG
TGCCGAACTTTGCGATGAACAGATCCGCTGCCAGTTGTTTCTTCTGCTTT
GATCGGTATGCGGAGCTGGAGTGCCAGTTTTACCGGCGTTGGAACCTCAG
TCAGCGCAAACACAAGAAACGGGCCAGAAGCGGTCGGTTCGTGGTCTGCG
AGTGCTGTCCAACTTCCGACGACGACGATGACTACGATGAGAATATATCC
TTGGCACACATAGCAGCGGCGGAAACGGCAAAGCGAAGACAGCAGCTGAG
CACGAGTTTTCCACGGAAGTTGGCGCGAACCCAGGCAGGATGGTATGGCA
AGGGCTATAAGAAAGGTCGGAAGAGACGGGCAAGCTTTCTAGACCAT
BO28671.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 10:40:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sirt7-RA | 2316 | CG11305-PA | 1..2313 | 17..2329 | 11565 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 10:40:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sirt7-RA | 3058 | CG11305-RA | 217..2530 | 16..2329 | 11570 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 10:40:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29056528..29058676 | 181..2329 | 10745 | 100 | Plus |
| 3R | 32079331 | 3R | 29056143..29056310 | 16..183 | 840 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 10:40:23 has no hits.
BO28671.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-19 10:43:14 Download gff for
BO28671.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sirt7-RA | 213..2525 | 17..2331 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:20:00 Download gff for
BO28671.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sirt7-RA | 218..2530 | 17..2331 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 11:27:53 Download gff for
BO28671.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sirt7-RA | 218..2530 | 17..2331 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 11:27:53 Download gff for
BO28671.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29056144..29056308 | 17..181 | 100 | -> | Plus |
| 3R | 29056529..29058676 | 182..2331 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:20:00 Download gff for
BO28671.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 24881866..24882030 | 17..181 | 100 | -> | Plus |
| arm_3R | 24882251..24884398 | 182..2331 | 99 | | Plus |
BO28671.pep Sequence
Translation from 16 to 2347
> BO28671.pep
MEKDLGEEKDQDQEQNTEMEPKQEMDVAQSYITRAKMNPAKKDNEKRRRK
DAMRRVSMILRKCDSMRTTEDRQFLEKHPDMVKTTKKRKERVEIYKERVV
EREDAPHVIEAKVEQLANIISQAKHLVCYTGAGISTAALIPDYRGSQGIW
TLLQKGQDIGEHDLSSANPTYTHMALYELHRRRLLHHVVSQNCDGLHLRS
GLPRNSLSEIHGNMYVEVCKNCRPNSVYWRQFDTTEMTARYCHKTHRLCH
RCSEPLYDTIVHFGERGNVKWPLNWAGATANAQRADVILCLGSSLKVLKK
YTWLWQMDRPARQRAKICVVNLQWTPKDAIASIKINGKCDQVMAQLMHLL
HIPVPVYTKEKDPIFAHASLLMPEELHTLTQPLLKNADEEEAFTTTTEET
QDSTISSESCSFNYSDLPIGKGPRIRTPIKNGRRVKTNLELRQKFKTLNG
QDEEIKVEHVKTNGEVKTEKDLITLESSIKIETEVKLEKLECSDTNFQQE
LKLLELLPKLEPLSLKEETEETPSNGFPELPKLVAIQKTHAECLSAVPTE
SRLKPLQLPPLVPIGAPLSTPFVEPKLVLPPASQSSSIQIKSEGDGDSST
ENDNEEEEESELAQMDLLRQNNDEELLRQLPTWYDAKYAYSGLHSILIPP
PADLNIWNSQVVPNFAMNRSAASCFFCFDRYAELECQFYRRWNLSQRKHK
KRARSGRFVVCECCPTSDDDDDYDENISLAHIAAAETAKRRQQLSTSFPR
KLARTQAGWYGKGYKKGRKRRASFLDH
BO28671.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:08:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sirt7-PA | 771 | CG11305-PA | 1..771 | 1..771 | 4069 | 100 | Plus |
| Sirt6-PB | 325 | CG6284-PB | 22..283 | 101..363 | 365 | 35.2 | Plus |
| Sirt2-PB | 355 | CG5085-PB | 48..244 | 124..306 | 157 | 26.2 | Plus |
| Sirt2-PA | 355 | CG5085-PA | 48..244 | 124..306 | 157 | 26.2 | Plus |
