BO28694.complete Sequence
649 bp assembled on 2011-07-13
> BO28694.complete
GAAGTTATCAGTCGACATGTCGTTCAAGGCCGTCCCCCTTTTGTTGGCTA
TCGGCGCCGTCTTCGTGGCTGCCGTGCCCACTCCCGTCGAGACCGAGAGG
GAGTCCTCGCTGGTGGAGCTCCTGCTCAGTTCTCCGGCCATGCGATCGGA
TCTCTTCAACGTCGAATGCGTGGACTACTACAGCCCGCTCCTTAAGGGTC
ACGTGGACAAGTACAACGAGGACTTCACCGCGTGCAAGGACAATTACGAC
GGGGCCTTCTCCCTGATCGACTCAAGCTACCGCAGTTCCCGCGACGAGCT
GTCCGTATCCGTGAGGGACACCTGCCTTTCCCTCCTGACCTGCAATGGCA
GGACCTCGAACTCCGATGCCTTCGAGTGCTTGGCCTCTGGGGGTCCTTCG
GCATCCAAGGAACTGGAGAAAGCTTCCTACAACGCATCCGACAACCAAAC
CAGCCTGCTCGCCGAGGTGTCCGTAATCTCGGAAACGCTATCCAGATGCC
AAATCGAAGCCTACCGGACCTACAACACCAACCACGGCGAGTGCTACGCC
GACATGGTAGCCTGCCTGGGTGATCCCAACTGGGAGTTTCCCAGCACGAA
CTACGTGCTCGCAAGCTTTCTAGACCATTCGTTTGGCGCGCGAAAGGGG
BO28694.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:55:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31041-RA | 597 | CG31041-PA | 1..594 | 17..610 | 2970 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:55:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31041-RA | 700 | CG31041-RA | 25..618 | 17..610 | 2970 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:55:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 29590507..29590882 | 392..17 | 1880 | 100 | Minus |
| 3R | 32079331 | 3R | 29590152..29590371 | 610..391 | 1100 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:55:36 has no hits.
BO28694.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-13 10:17:21 Download gff for
BO28694.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31041-RA | 25..618 | 17..610 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:13:19 Download gff for
BO28694.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31041-RA | 25..618 | 17..610 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:30:46 Download gff for
BO28694.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31041-RA | 25..618 | 17..610 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:30:46 Download gff for
BO28694.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 29590508..29590882 | 17..391 | 100 | | Minus |
| 3R | 29590152..29590370 | 392..610 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:13:19 Download gff for
BO28694.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25415874..25416092 | 392..610 | 100 | <- | Minus |
| arm_3R | 25416230..25416604 | 17..391 | 100 | | Minus |
BO28694.pep Sequence
Translation from 16 to 649
> BO28694.pep
MSFKAVPLLLAIGAVFVAAVPTPVETERESSLVELLLSSPAMRSDLFNVE
CVDYYSPLLKGHVDKYNEDFTACKDNYDGAFSLIDSSYRSSRDELSVSVR
DTCLSLLTCNGRTSNSDAFECLASGGPSASKELEKASYNASDNQTSLLAE
VSVISETLSRCQIEAYRTYNTNHGECYADMVACLGDPNWEFPSTNYVLAS
FLDHSFGARKG
BO28694.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:56:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31041-PA | 198 | CG31041-PA | 1..198 | 1..198 | 1024 | 100 | Plus |
| CG10912-PA | 271 | CG10912-PA | 1..189 | 1..188 | 236 | 28.4 | Plus |
| CG10911-PA | 359 | CG10911-PA | 1..185 | 1..184 | 230 | 29.2 | Plus |
| CG7567-PA | 211 | CG7567-PA | 50..193 | 41..184 | 148 | 25 | Plus |
