BO28696.complete Sequence
526 bp assembled on 2011-07-13
GenBank Submission: KX794276
> BO28696.complete
GAAGTTATCAGTCGACATGTCGGCTGATACTTTCGTAATGGACACCAAGG
ATGAATCGTTCTACGAGTGTAACATATGTCTAGACACCGCCCAGAATGCC
GTGGTCAGCATGTGTGGCCATTTGTTTTGCTGGCCATGTCTGTACCAATG
GATATTGACGAAACCCGATCACACAGTGTGTCCCGTTTGCAAGTCGGGCG
TGGATAGGAGCAAAGTAATACCGGTGTACGCACGAAATGATAAAAGGCAG
GAGGATCCGCGGGATAAAACACCGCCGCGTCCAACTGGAATTTGGTCGGA
TTACGCAAATGATCTCGAGTTGGGACTATTTTCGTACTTGCTTTTTGGTT
TATTCTTTCCATATGGTGCCCTATCATCTTATCTGGATATGGACGAGCCA
CTCAATCCTGCTGCTGATCACGGCATAAGGGATGGGCAGAACGAAACACT
CCTTTCTAAGTTCTTTCTCTACGTGGCCATTATGCTCATTATTTATATGA
TTGTAATTGCAAGCTTTCTAGACCAT
BO28696.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:56:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32847-RB | 495 | CG32847-PB | 1..492 | 17..508 | 2460 | 100 | Plus |
CG8974-RE | 834 | CG8974-PE | 365..543 | 60..238 | 310 | 78.2 | Plus |
CG8974-RD | 834 | CG8974-PD | 365..543 | 60..238 | 310 | 78.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:56:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32847-RB | 730 | CG32847-RB | 51..542 | 17..508 | 2460 | 100 | Plus |
CG8974-RE | 1317 | CG8974-RE | 468..646 | 60..238 | 310 | 78.2 | Plus |
CG8974-RD | 1280 | CG8974-RD | 431..609 | 60..238 | 310 | 78.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:56:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15121622..15122113 | 17..508 | 2460 | 100 | Plus |
X | 23542271 | X | 15797690..15797868 | 238..60 | 310 | 78.2 | Minus |
X | 23542271 | X | 15794520..15794698 | 238..60 | 310 | 78.2 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:56:39 has no hits.
BO28696.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-07-13 12:35:28 Download gff for
BO28696.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32847-RB | 51..542 | 17..510 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:13:43 Download gff for
BO28696.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32847-RB | 51..542 | 17..510 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:31:14 Download gff for
BO28696.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32847-RB | 51..542 | 17..510 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:31:14 Download gff for
BO28696.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15121622..15122113 | 17..510 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:13:43 Download gff for
BO28696.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15114722..15115213 | 17..510 | 99 | | Plus |
BO28696.pep Sequence
Translation from 16 to 526
> BO28696.pep
MSADTFVMDTKDESFYECNICLDTAQNAVVSMCGHLFCWPCLYQWILTKP
DHTVCPVCKSGVDRSKVIPVYARNDKRQEDPRDKTPPRPTGIWSDYANDL
ELGLFSYLLFGLFFPYGALSSYLDMDEPLNPAADHGIRDGQNETLLSKFF
LYVAIMLIIYMIVIASFLDH
BO28696.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:56:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32847-PB | 164 | CG32847-PB | 1..164 | 1..164 | 897 | 100 | Plus |
CG8974-PE | 277 | CG8974-PE | 117..274 | 10..161 | 438 | 51.3 | Plus |
CG8974-PD | 277 | CG8974-PD | 117..274 | 10..161 | 438 | 51.3 | Plus |
CG8974-PB | 277 | CG8974-PB | 117..274 | 10..161 | 438 | 51.3 | Plus |
CG8974-PA | 277 | CG8974-PA | 117..274 | 10..161 | 438 | 51.3 | Plus |