BO28710.complete Sequence
598 bp assembled on 2011-08-24
GenBank Submission: KX798190
> BO28710.complete
GAAGTTATCAGTCGACATGGCCCAAAAAGTGATCAAGTACATCGGTCGCA
CCACAGACTTTCGCGGCAACACGCTGTGGGAGCTGGTCTCAAACCTGCCC
AACTGGGGTGTGGGCCGTCTGCTAATACGTAACATGTTCCAGCGATATCC
GGAGCCCTGCTACATGCGGATTCTGAAGGTGCAGTCCGTGGACGAGCAGC
CCGGCGAGATCCGCAAGGTGCGGGTCACTGTGGAGAAAACGTGGCGCGGC
GTAACGCAGCCAAAGCCTGTGGAAATCTACAGCACCAGCTATAAGGCGGA
CTACGAACTGGTGCCGCAGGATCAGGAAGCAAAGTATCTGAACAACAAGA
AGAAGGTTGAACCAGTGATACTGCCCACCAAGATTGAACTTCCGCCTCTG
CTCCGCGAACTGGTATCGGAGGAAACGGGCAACCCCAATCCCCAGATGAA
GGTCCACTACAAACTGACCGACAACAAAATGGCCAGATTAGCCAAGGATG
GAGAAAAGCCAACTGTTAACTTTGCCCTTGGTGTGGGCCAGCCGAAACCC
GTGAGCGCCAAGCTTTACGAAGGATTATTAGCAAGCTTTCTAGACCAT
BO28710.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:35:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpS34-RA | 567 | CG42648-PA | 1..564 | 17..580 | 2820 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:35:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpS34-RA | 709 | CG13037-RA | 94..657 | 17..580 | 2820 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:35:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16348167..16348730 | 17..580 | 2820 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 06:35:09 has no hits.
BO28710.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:34:20 Download gff for
BO28710.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpS34-RA | 71..634 | 17..582 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:47:26 Download gff for
BO28710.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpS34-RA | 94..657 | 17..582 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:48:55 Download gff for
BO28710.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpS34-RA | 94..657 | 17..582 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:48:55 Download gff for
BO28710.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16348167..16348730 | 17..582 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:47:26 Download gff for
BO28710.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16341267..16341830 | 17..582 | 99 | | Plus |
BO28710.pep Sequence
Translation from 16 to 598
> BO28710.pep
MAQKVIKYIGRTTDFRGNTLWELVSNLPNWGVGRLLIRNMFQRYPEPCYM
RILKVQSVDEQPGEIRKVRVTVEKTWRGVTQPKPVEIYSTSYKADYELVP
QDQEAKYLNNKKKVEPVILPTKIELPPLLRELVSEETGNPNPQMKVHYKL
TDNKMARLAKDGEKPTVNFALGVGQPKPVSAKLYEGLLASFLDH
BO28710.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:20:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpS34-PA | 188 | CG13037-PA | 1..188 | 1..188 | 987 | 100 | Plus |