BO28712.complete Sequence
418 bp assembled on 2011-08-24
GenBank Submission: KX794872
> BO28712.complete
GAAGTTATCAGTCGACATGCATCCGGAACGCTACGCCAGTCCAAATCCAT
TGATACCATTGGTAATCGCAGGCGCCCTGCTCTTCTCGATGCTCTCGCAG
GTGAGCGGCTACTCGGGACGAATTCCACCGGATGCAGATAATCCCGGGAA
GTGCATGTACCGCGGTGACGTCCTGGAACTGGGTGTCAACAATGGCATCG
CTCCCTGCCAGCGACTGACTTGCAACAAGGATGGATCAATACTTATCGAG
GGTTGCGGCAAACTGCGCATCGAAAACTGCAACCGAGGCGAGCGAATCTC
TCCGGGTGAACCCTTTCCGGAATGCTGCAAGCTGAGATACAAGTGCAAGC
AAATCGGAGCGGCACCCTACTACATCGAGCGGAATACGGCGGAGAAGGTC
GCAAGCTTTCTAGACCAT
BO28712.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:35:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15203-RB | 387 | CG15203-PB | 1..384 | 17..400 | 1920 | 100 | Plus |
| CG15203-RA | 387 | CG15203-PA | 1..384 | 17..400 | 1920 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:35:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15203-RB | 900 | CG15203-RB | 61..444 | 17..400 | 1920 | 100 | Plus |
| CG15203-RA | 610 | CG15203-RA | 53..436 | 17..400 | 1920 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:35:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11067775..11067923 | 252..400 | 745 | 100 | Plus |
| X | 23542271 | X | 11066612..11066732 | 17..137 | 605 | 100 | Plus |
| X | 23542271 | X | 11066813..11066930 | 135..252 | 590 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 06:35:43 has no hits.
BO28712.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:34:21 Download gff for
BO28712.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15203-RA | 33..416 | 17..402 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:47:44 Download gff for
BO28712.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15203-RA | 53..436 | 17..402 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:49:11 Download gff for
BO28712.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15203-RA | 53..436 | 17..402 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:49:11 Download gff for
BO28712.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11066612..11066732 | 17..137 | 100 | -> | Plus |
| X | 11066816..11066930 | 138..252 | 100 | -> | Plus |
| X | 11067776..11067923 | 253..402 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:47:44 Download gff for
BO28712.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10960645..10960765 | 17..137 | 100 | -> | Plus |
| arm_X | 10960849..10960963 | 138..252 | 100 | -> | Plus |
| arm_X | 10961809..10961956 | 253..402 | 98 | | Plus |
BO28712.pep Sequence
Translation from 16 to 418
> BO28712.pep
MHPERYASPNPLIPLVIAGALLFSMLSQVSGYSGRIPPDADNPGKCMYRG
DVLELGVNNGIAPCQRLTCNKDGSILIEGCGKLRIENCNRGERISPGEPF
PECCKLRYKCKQIGAAPYYIERNTAEKVASFLDH
BO28712.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:20:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15203-PB | 128 | CG15203-PB | 1..128 | 1..128 | 697 | 100 | Plus |
| CG15203-PA | 128 | CG15203-PA | 1..128 | 1..128 | 697 | 100 | Plus |
