BO28732.complete Sequence
1441 bp assembled on 2011-08-24
GenBank Submission: KX800145
> BO28732.complete
GAAGTTATCAGTCGACATGACCCAGATCCCCGAGAGCTGTTATAAGATGT
GGGGTGGTAGGTTCACCGAGGGGCCGCATGAGGCTCTCCATTCGCTGAAT
AACAGCCTGCCCTACGATTCTCGCCTCTATGCGGATGATTTGGACGCCAG
CAAGGCGTATGCAGAGGCACTCCATCGAGCTGGTCTCATCAACTCAGCCG
AGGCGGATAAGTTGGTAAAGAATCTGGAGCTGTTGCGATTCGATTGGATC
GAGGGAACTGTGAAGATTCTACCCGGTGACGAGGATGTGCACACGGTGAA
CGAGCGATTGCTGGTGGAGATTACCGGCGAACTGGGCCAGCGGCTTCACA
CGGGCAGAAGCAGAAATGACCAGGTGGTCACGGACATGAAGCTATGGCTT
CGCAAGGCCATTCGTGAGACCTTGGGCCGGCTGAGTGGCATCATTGAAAC
TGCCACCAGGCAGGCGGAACTCCACCTGGGCGTCCTCATGCCAGGATACA
CGCATCTGCAGCGGGCCCAGACCGTTCAGTTCTCCCACTGGCTGCTCTCG
CACGCGTTTGCATTAAGGGAAGATGGCCAGCGGCTGTTGGAGCTAAGGGA
TCGGGCGAATGTCCTGCCCCTTGGAAGTGGCGCTCTGGCGGGAAATCCCC
TTGGCATCGATCGTTTGTGGCTGGCCGAGAGGCTGGGATTCTCGGGTGTC
ACAGCCAACAGCATGCACGCCGTGGGAGATCGAGATTTTGTAGTTGACTT
CATCTACTGCTGCTCTATGGTGAGCCTGCATCTGTCCCGATTGGCGGAGG
ATTTGATCATCTACAGTACCAAGGAGTTCGACTTCATCAAACTGGCCGAT
GGCTTTTCCAGTGGCAGCAGCCTGATGCCTCAGAAAAGGAATCCGGACAG
CTTGGAGCTGATTCGCGGCATGGCCGGTGTGATCACCGCCAATCTGACGG
GCATAATGATGACCATTAAGGGCACTCCGTCCACCTACAACAAGGACTTG
CAGTACGACAAGCAATTCTGCTTCCAGTCCTTCGACAAGCTGTCCCAAGT
GCTCGAGGTTACCGATGGTGTCCTACAGACGATTCAGGTCAAGCAGGAAT
CAATGGAGGCGGCACTTAGCACAGACATGCTGGCCACTGACTGGGCCTAC
TATCTGGTGAAGAAGGGGGTTCCATTCCGCCAGGCGCATCACATTATCGG
TCGCGTGGTCTCGGAGGCCGAAAAGCGCGGTGTGGACATCACTGATTTGC
CGCTGGGAGATCTCCAGAAATTCAGTCCTTTATTTGGATCGGATATCGTT
GCAGTGGCGGACTACTCCAACAATGTCCAGCAATATAATGCGATTGGTGG
AACCGCCAGTAGCAGCATCGTGGAACAACTGCGTTTGCTCAAGAAGTGCG
CAAGGGATTTGGCCAAACAGTCGGCAAGCTTTCTAGACCAT
BO28732.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:41:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9510-RD | 1410 | CG9510-PD | 1..1407 | 17..1423 | 7035 | 100 | Plus |
CG9510-RC | 1410 | CG9510-PC | 1..1407 | 17..1423 | 7035 | 100 | Plus |
CG9510-RB | 1410 | CG9510-PB | 1..1407 | 17..1423 | 7035 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:41:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9510-RD | 1640 | CG9510-RD | 39..1446 | 16..1423 | 7040 | 100 | Plus |
CG9510-RC | 1922 | CG9510-RC | 381..1788 | 16..1423 | 7040 | 100 | Plus |
CG9510-RB | 1580 | CG9510-RB | 39..1446 | 16..1423 | 7040 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:41:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8940994..8941725 | 747..16 | 3645 | 99.9 | Minus |
2L | 23513712 | 2L | 8940254..8940658 | 1145..741 | 2025 | 100 | Minus |
2L | 23513712 | 2L | 8939919..8940198 | 1423..1144 | 1400 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 06:41:25 has no hits.
BO28732.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:34:30 Download gff for
BO28732.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9515-RA | 1257..2663 | 17..1425 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:50:52 Download gff for
BO28732.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9510-RB | 40..1446 | 17..1425 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:51:50 Download gff for
BO28732.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9510-RB | 40..1446 | 17..1425 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:51:50 Download gff for
BO28732.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8939917..8940197 | 1145..1425 | 99 | <- | Minus |
2L | 8940255..8940655 | 744..1144 | 100 | <- | Minus |
2L | 8940998..8941724 | 17..743 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:50:52 Download gff for
BO28732.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8939917..8940197 | 1145..1425 | 99 | <- | Minus |
arm_2L | 8940255..8940655 | 744..1144 | 100 | <- | Minus |
arm_2L | 8940998..8941724 | 17..743 | 100 | | Minus |
BO28732.pep Sequence
Translation from 16 to 1441
> BO28732.pep
MTQIPESCYKMWGGRFTEGPHEALHSLNNSLPYDSRLYADDLDASKAYAE
ALHRAGLINSAEADKLVKNLELLRFDWIEGTVKILPGDEDVHTVNERLLV
EITGELGQRLHTGRSRNDQVVTDMKLWLRKAIRETLGRLSGIIETATRQA
ELHLGVLMPGYTHLQRAQTVQFSHWLLSHAFALREDGQRLLELRDRANVL
PLGSGALAGNPLGIDRLWLAERLGFSGVTANSMHAVGDRDFVVDFIYCCS
MVSLHLSRLAEDLIIYSTKEFDFIKLADGFSSGSSLMPQKRNPDSLELIR
GMAGVITANLTGIMMTIKGTPSTYNKDLQYDKQFCFQSFDKLSQVLEVTD
GVLQTIQVKQESMEAALSTDMLATDWAYYLVKKGVPFRQAHHIIGRVVSE
AEKRGVDITDLPLGDLQKFSPLFGSDIVAVADYSNNVQQYNAIGGTASSS
IVEQLRLLKKCARDLAKQSASFLDH
BO28732.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:21:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9510-PD | 469 | CG9510-PD | 1..469 | 1..469 | 2404 | 100 | Plus |
CG9510-PC | 469 | CG9510-PC | 1..469 | 1..469 | 2404 | 100 | Plus |
CG9510-PB | 469 | CG9510-PB | 1..469 | 1..469 | 2404 | 100 | Plus |