BO28733.complete Sequence
940 bp assembled on 2011-08-24
GenBank Submission: KX794570
> BO28733.complete
GAAGTTATCAGTCGACATGAACAGTGCCGTACCGCCCGGCGTGTTGGGAC
TACCCTATCGATTTTCGGATGAGCGTACGGTCAAGTTCGTAGAGCTTTAC
GGCCGGGAACCTTGTCTCTGGAACAAGCGACCATATTTGCGACGAGCTCG
AAGCGCCGCCTATCGGCGAATTCAGTCCGGGATCAATGCTGATATTGAAC
CATATGAGTCAGGTCTTACCATCCAGGGCGTAAAGATGAAGATCAAGAAT
CTTCGTACTGGGTACCACCAGGAGCTAAAGAAGATCCGAACTATTCCGGG
ATATCAGCCAAAGACGCCCTGGTTTGCCCCACTTCACGGGTTTTTGGCAG
AGTTCTTGGACACGAATGAGTTGGAAACATCAATTCCTCAACTAAAGCGC
CTACAGATTCGACTTACCAGACTGAAGCCGATTAAGATTCAGACGGAGAT
TAAGCCAGATCCCGATGACTTGTCAGTCCCCGATAGGCCGTTGGATGCTA
CACCCTCTTCCTTATTTACCGTTCTGCCAGCACCTATGCCCGTGGAGGAG
CCTCCCACTCCACCGCCTTCCGTGCCCAAGATCGGAGACATCATCTCACC
AGTACATCCAGACCCAGCGCCTGTTCCGATAGCAGGGAACTGTCCTCTGT
CGACAGCCTGCTCCATTTCTGAAAAAAGTGAGGTCTTGGGATTGGGCCTG
GGAGTATCGGCAGCTGGACGGACGAATGGAGTTGGCCTTGGAGTTGAAAT
GCGAGGCGAGGACGAATTCACCTACTTCGGGTTGAGCGTTGCAGCGCAAA
TCCGTAATATGCCATTGGCCAGTGCCATGCTAATGCAGTCGAAAATCCAG
TATATGCTCTCTATGGAGCGTCGTAAGATTAACGGTCATCCTGGCGATAT
GGACATATTTCTAACTAAAAACGCAAGCTTTCTAGACCAT
BO28733.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:41:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30403-RB | 909 | CG30403-PB | 1..906 | 17..922 | 4530 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:41:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30403-RB | 1268 | CG30403-RB | 145..1051 | 16..922 | 4535 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:41:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 21710112..21710670 | 922..364 | 2795 | 100 | Minus |
| 2R | 25286936 | 2R | 21711121..21711469 | 364..16 | 1745 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 06:41:40 has no hits.
BO28733.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:34:31 Download gff for
BO28733.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30403-RB | 142..1047 | 17..924 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:51:00 Download gff for
BO28733.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30403-RB | 146..1051 | 17..924 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:51:55 Download gff for
BO28733.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG30403-RB | 146..1051 | 17..924 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:51:55 Download gff for
BO28733.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 21711121..21711468 | 17..364 | 100 | | Minus |
| 2R | 21710110..21710669 | 365..924 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:51:00 Download gff for
BO28733.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 17597615..17598174 | 365..924 | 99 | <- | Minus |
| arm_2R | 17598626..17598973 | 17..364 | 100 | | Minus |
BO28733.pep Sequence
Translation from 16 to 940
> BO28733.pep
MNSAVPPGVLGLPYRFSDERTVKFVELYGREPCLWNKRPYLRRARSAAYR
RIQSGINADIEPYESGLTIQGVKMKIKNLRTGYHQELKKIRTIPGYQPKT
PWFAPLHGFLAEFLDTNELETSIPQLKRLQIRLTRLKPIKIQTEIKPDPD
DLSVPDRPLDATPSSLFTVLPAPMPVEEPPTPPPSVPKIGDIISPVHPDP
APVPIAGNCPLSTACSISEKSEVLGLGLGVSAAGRTNGVGLGVEMRGEDE
FTYFGLSVAAQIRNMPLASAMLMQSKIQYMLSMERRKINGHPGDMDIFLT
KNASFLDH
BO28733.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:21:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG30403-PB | 302 | CG30403-PB | 1..302 | 1..302 | 1581 | 100 | Plus |
