BO28738.complete Sequence
748 bp assembled on 2011-08-24
GenBank Submission: KX799896
> BO28738.complete
GAAGTTATCAGTCGACATGGCCCTGTCCAAGATCGACACCGAGATCGAGC
AGGTTGACCAGGAGAAGTACCTGCGTCAGGCCACTAGCTACTATCAGCCG
CTGGAGAAACCCCTGAAATACGGACCGGAGGTGAATTCCCTATCGGACTT
GGTGGCCGCCCTTCACCGGGAATTCGAGTCGAACTATGTTAACATCGAGA
TGGTGAATCACCTTATGCTCAGCTACAAGTCCAATCCGCGGGAGTGGCGC
AAATATGCCAAGTTCGATCGTTACACCTACACGCGGAATCTCGTGGATGC
TGGCAATGGAAAGTTCAATCTGCTGATTCTGTGCTGGGGCGAAGGACACG
GCTCCTCGGTGCACGACCATGCCGATTCCCATTGCTTCATGAAGATGCTG
AAGGGTGATCTGCGCGAGAAGCGCTACGAGTATCCCAATAGATCTGCCAG
GGACAACGGCCGGTCCCATCATCCCGATGGCGAGATCGATAGCCGAGAGC
TGGTGGAGATTGGGGAGACACCAATCGCCGTCAATGATGTGGCCTACATA
AATGACAATCTGGGTCTGCATCGCGTGGAGAACCCCAGCCATTCGGATAC
CTCTGTCTCCCTTCACCTATACTGTCCACCCTTCGACACGTGCTCCGTGT
TCCAGGACAACCTGAAGAAGACCACCGCCAAGGTCACCTTCTGGAGCAAA
TACGGCGTGAGGACGAAGCAGAACGAGCAGGCAAGCTTTCTAGACCAT
BO28738.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:43:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5493-RD | 717 | CG5493-PD | 1..714 | 17..730 | 3570 | 100 | Plus |
CG5493-RC | 717 | CG5493-PC | 1..714 | 17..730 | 3570 | 100 | Plus |
CG5493-RB | 717 | CG5493-PB | 1..714 | 17..730 | 3570 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:43:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5493-RD | 1031 | CG5493-RD | 63..776 | 17..730 | 3570 | 100 | Plus |
CG5493-RC | 1130 | CG5493-RC | 162..875 | 17..730 | 3570 | 100 | Plus |
CG5493-RB | 1161 | CG5493-RB | 193..906 | 17..730 | 3570 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:42:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18617200..18617737 | 554..17 | 2690 | 100 | Minus |
2R | 25286936 | 2R | 18616947..18617123 | 730..554 | 885 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 06:43:00 has no hits.
BO28738.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:34:34 Download gff for
BO28738.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5493-RA | 203..916 | 17..732 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:51:43 Download gff for
BO28738.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5493-RB | 193..906 | 17..732 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:52:28 Download gff for
BO28738.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5493-RB | 193..906 | 17..732 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:52:28 Download gff for
BO28738.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18616945..18617122 | 555..732 | 98 | <- | Minus |
2R | 18617200..18617737 | 17..554 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:51:43 Download gff for
BO28738.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14504450..14504627 | 555..732 | 98 | <- | Minus |
arm_2R | 14504705..14505242 | 17..554 | 100 | | Minus |
BO28738.pep Sequence
Translation from 16 to 748
> BO28738.pep
MALSKIDTEIEQVDQEKYLRQATSYYQPLEKPLKYGPEVNSLSDLVAALH
REFESNYVNIEMVNHLMLSYKSNPREWRKYAKFDRYTYTRNLVDAGNGKF
NLLILCWGEGHGSSVHDHADSHCFMKMLKGDLREKRYEYPNRSARDNGRS
HHPDGEIDSRELVEIGETPIAVNDVAYINDNLGLHRVENPSHSDTSVSLH
LYCPPFDTCSVFQDNLKKTTAKVTFWSKYGVRTKQNEQASFLDH
BO28738.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:21:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5493-PD | 238 | CG5493-PD | 1..238 | 1..238 | 1282 | 100 | Plus |
CG5493-PC | 238 | CG5493-PC | 1..238 | 1..238 | 1282 | 100 | Plus |
CG5493-PB | 238 | CG5493-PB | 1..238 | 1..238 | 1282 | 100 | Plus |
CG5493-PA | 238 | CG5493-PA | 1..238 | 1..238 | 1282 | 100 | Plus |