Clone BO28749 Report

Search the DGRC for BO28749

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:287
Well:49
Vector:pDNR-Dual
Associated Gene/TranscriptCG14966-RA
Protein status:BO28749.pep: Imported from assembly
Sequenced Size:454

Clone Sequence Records

BO28749.complete Sequence

454 bp assembled on 2011-08-24

GenBank Submission: KX797881

> BO28749.complete
GAAGTTATCAGTCGACATGCGCCGCTTGTTTACATCGGTCAACGCCCAAA
TAATGTCGAAGAGCAAGGGGAAATCAAAGGCCGGCGTTGAAAGTGCGAAA
AACGATGCAAAAGCGATGCCGGCTAAGGAAGCCAGTCCGATTTCAGTCGA
TAAGAGCGGCAATATATGCATACAAATCCTTGCCAAGCCGGGGGCTAAGC
AGAACGGAATCACAGGAATTGGCTTTGAAGGAGTGGGCGTCCAAATCGCC
GCTCCGCCCAGCGAGGGAGAAGCTAACGCCGAACTGGTCAAGTTTCTGTC
GAAAGTTCTAGGTCTTCGAAAGAGCGACGTTTCTTTGGACAAGGGATCTC
GATCGCGAAACAAGATAATAATGATAACCAAGGGAGTGTCCACGGTGGAG
GCCATTGAGCAGCTGCTGCGCAAAGAATCCGATTCAGCAAGCTTTCTAGA
CCAT

BO28749.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:46:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG14966-RA 423 CG14966-PA 1..420 17..436 2100 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:46:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG14966-RA 587 CG14966-RA 112..531 17..436 2100 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:46:22
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3197101..3197520 436..17 2100 100 Minus
Blast to na_te.dros performed on 2014-11-27 06:46:22 has no hits.

BO28749.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:34:40 Download gff for BO28749.complete
Subject Subject Range Query Range Percent Splice Strand
CG14966-RA 1..420 17..438 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:53:37 Download gff for BO28749.complete
Subject Subject Range Query Range Percent Splice Strand
CG14966-RA 112..531 17..438 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:53:56 Download gff for BO28749.complete
Subject Subject Range Query Range Percent Splice Strand
CG14966-RA 112..531 17..438 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:53:56 Download gff for BO28749.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3197099..3197520 17..438 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:53:37 Download gff for BO28749.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3197099..3197520 17..438 99   Minus

BO28749.pep Sequence

Translation from 16 to 454

> BO28749.pep
MRRLFTSVNAQIMSKSKGKSKAGVESAKNDAKAMPAKEASPISVDKSGNI
CIQILAKPGAKQNGITGIGFEGVGVQIAAPPSEGEANAELVKFLSKVLGL
RKSDVSLDKGSRSRNKIIMITKGVSTVEAIEQLLRKESDSASFLDH

BO28749.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:22:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG14966-PA 140 CG14966-PA 1..140 1..140 679 100 Plus