BO28753.complete Sequence
505 bp assembled on 2011-08-24
GenBank Submission: KX795178
> BO28753.complete
GAAGTTATCAGTCGACATGTCGTTTGCGGAAAAGATAACGGGTCTGCTGG
CACGGCCGAATCAACAAGATCCAATTGGACCGGAGCAGCCGTGGTATCTC
AAATATGGAAGTCGATTGCTGGGCATTGTGGCCGCCTTCTTTGCCATTCT
TTTCGGCCTGTGGAATGTGTTCTCCATCATCACGCTCAGCGTATCCTGCC
TGGTGGCTGGCATCCTTCAAATGGTGGCAGGATTTGTGGTGATGCTCTTG
GAGGCTCCCTGCTGTTTCGTCTGCTTTGGGCAGGTGAACGAGATCGCGGA
AAAGGTGGAATCTAAGCCCTTGTACTTCCGTGCCGGGCTCTACATTGCCA
TGGCCATTCCGCCCATTATTCTGTGCTTTGGACTGGCCAGCTTATTCGGC
AGTGGGCTGATCTTTGGCACTGGCGTGGTTTACGGCATGATGGCGTTAGG
CAAGAACAAGCATATATTTTTAGTGAGAAACTATATTGCAAGCTTTCTAG
ACCAT
BO28753.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:46:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fwe-RC | 474 | CG6151-PC | 1..471 | 17..487 | 2355 | 100 | Plus |
| fwe-RA | 585 | CG6151-PA | 1..440 | 17..456 | 2200 | 100 | Plus |
| fwe-RB | 579 | CG6151-PB | 1..440 | 17..456 | 2200 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:46:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fwe-RC | 2364 | CG6151-RC | 134..605 | 16..487 | 2360 | 100 | Plus |
| fwe-RA | 1342 | CG6151-RA | 134..574 | 16..456 | 2205 | 100 | Plus |
| fwe-RB | 3020 | CG6151-RB | 134..574 | 16..456 | 2205 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:46:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15813419..15813626 | 348..141 | 1040 | 100 | Minus |
| 3L | 28110227 | 3L | 15815936..15816057 | 140..19 | 610 | 100 | Minus |
| 3L | 28110227 | 3L | 15813246..15813353 | 456..349 | 540 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 06:46:48 has no hits.
BO28753.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:34:41 Download gff for
BO28753.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| flower-RC | 140..610 | 17..489 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:53:54 Download gff for
BO28753.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fwe-RC | 135..605 | 17..489 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:54:07 Download gff for
BO28753.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fwe-RC | 135..605 | 17..489 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:54:07 Download gff for
BO28753.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15812208..15812241 | 457..489 | 94 | <- | Minus |
| 3L | 15813246..15813353 | 349..456 | 100 | <- | Minus |
| 3L | 15813419..15813626 | 141..348 | 100 | <- | Minus |
| 3L | 15815936..15816058 | 17..140 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:53:54 Download gff for
BO28753.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15805308..15805341 | 457..489 | 94 | <- | Minus |
| arm_3L | 15806346..15806453 | 349..456 | 100 | <- | Minus |
| arm_3L | 15806519..15806726 | 141..348 | 100 | <- | Minus |
| arm_3L | 15809036..15809158 | 17..140 | 99 | | Minus |
BO28753.pep Sequence
Translation from 16 to 505
> BO28753.pep
MSFAEKITGLLARPNQQDPIGPEQPWYLKYGSRLLGIVAAFFAILFGLWN
VFSIITLSVSCLVAGILQMVAGFVVMLLEAPCCFVCFGQVNEIAEKVESK
PLYFRAGLYIAMAIPPIILCFGLASLFGSGLIFGTGVVYGMMALGKNKHI
FLVRNYIASFLDH
BO28753.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:22:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fwe-PC | 157 | CG6151-PC | 1..157 | 1..157 | 813 | 100 | Plus |
| fwe-PB | 192 | CG6151-PB | 1..146 | 1..146 | 754 | 100 | Plus |
| fwe-PA | 194 | CG6151-PA | 1..146 | 1..146 | 754 | 100 | Plus |
