BO28791.complete Sequence
1720 bp assembled on 2011-10-14
GenBank Submission: KX794518
> BO28791.complete
GAAGTTATCAGTCGACATGTGGTTTTTATGGCTGATCTGCTTGCTGCTGC
CAATCATTGATGCAGCTGAGGTTGAAAAATCTCCTGCAAAGCCCAACATT
ATATTTATTTTGGCGGATGATTTGGGCTTCAACGATGTGGGATTCCATGG
CTCGGCAGAGATTCCCACGCCTAACATTGATGCCTTGGCCTATTCTGGCA
TTATTCTGAATCGTTACTATGTGGCACCCATTTGTACTCCATCCAGATCT
GCCCTTATGACGGGAAAATATCCCATACACACAGGAATGCAACATACAGT
TCTCTATGCCGCTGAACCACGAGGTTTGCCCTTGGAGGAGAAAATACTAC
CTCAATATTTGAATGAGTTGGGCTACACCTCTCACATAGCTGGCAAGTGG
CATTTAGGCCATTGGAAGCTGAAGTACACTCCGTTGTATCGCGGCTTCAG
TAGCCACGTGGGATTCTGGTCGGGTCACCAGGATTACAACGATCACACCG
CCGTGGAGAACAACCAGTGGGGTCTAGACATGCGCAATGGAACACAAGTG
GCCTATGACTTGCATGGTCACTACACCACGGATGTGATAACCGATCACTC
GGTTAAGGTCATTGCCAACCATAATGCCACCAAGGGTCCACTGTTTCTCT
ACGTAGCCCATGCGGCTTGTCACTCGAGTAATCCGTATAATCCTCTGCCG
GTTCCGGACAACGATGTGATCAAGATGTCGCACATTCCCAACTATAAACG
GCGAAAATTTGCTGCTATGGTTTCCAAAATGGACAACTCTGTGGGTCAAA
TTGTGGATCAGCTGCGCAAGTCGAACATGCTGGAGAACTCGATCATCATA
TTCTCCTCGGATAACGGGGGACCAGCCCAAGGATTCAACCTTAACTTCGC
CTCCAACTATCCCCTGAAGGGTGTGAAGAATACCCTGTGGGAGGGCGGAG
TTAGAGCAGCGGGTCTCATGTGGTCACCTCTGCTGAAGAAAAGCCAACGA
GTGTCCAACCAGACCATGCACATCATTGACTGGTTGCCCACGCTCCTGGA
GGCAGCTGGTGGTCAACCAGCGTTGTCTAATCTCAGCAAGCAAATCGATG
GCCAGAGCATTTGGCGGGCACTGGTTCAGGACAAGGCATCTCCTCGCTTG
AATGTACTGCACAATATCGATGATATATGGGGCAGTGCAGCGCTCAGCGT
TGGAGATTGGAAGCTGGTCAAGGGCACCAATTACCGGGGTAGTTGGGATG
GTTGGTACGGTCCGGCTGGGGAAAGAGATCCTCGTCTGTACGACTGGCAG
TTGGTGGGCAGGAGTAGGGCGGGCAAAGCGCTGGAGGCTCTCAAGATGCT
GCCAAGTCGGGCGGATCAGCAGAGAATACGAGCAGCTGCCACGGTGTCGT
GCCCGGGACAATCCTCCCAAGGAACCAGTTGTGTGGCCACCGCATTCTCT
GCTCCGTGCTTGTTCCACATTCGCGATGATCCCTGTGAGCAGTACAATCT
GGCCAAGCAATATCCGGAAGTGGTAAACGCATTGATGACAGAACTCGAGC
GATTCAATGCCACCGCAGTGCCGCCCTCGAATAAACCAGCTGATCCTCGA
GCTGATCCCAGATTCTGGAACTATACGTGGACAAACTTTGGGGACTATCA
AAATAACGATCTTGATACTTTTAGTGGGGATATTACTTTGGCAAAGACTG
TGGCAAGCTTTCTAGACCAT
BO28791.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:55:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8646-RB | 1689 | CG8646-PB | 1..1686 | 17..1702 | 8430 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:55:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8646-RB | 1763 | CG8646-RB | 53..1738 | 17..1702 | 8430 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:55:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12658313..12659065 | 757..1509 | 3735 | 99.7 | Plus |
2R | 25286936 | 2R | 12657815..12658207 | 372..764 | 1965 | 100 | Plus |
2R | 25286936 | 2R | 12659124..12659316 | 1510..1702 | 965 | 100 | Plus |
2R | 25286936 | 2R | 12657458..12657619 | 124..285 | 810 | 100 | Plus |
2R | 25286936 | 2R | 12657284..12657392 | 17..125 | 545 | 100 | Plus |
2R | 25286936 | 2R | 12657673..12657762 | 283..372 | 450 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:55:19 has no hits.
BO28791.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-10-14 10:57:34 Download gff for
BO28791.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8646-RB | 51..1736 | 17..1704 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:40:51 Download gff for
BO28791.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8646-RB | 53..1738 | 17..1704 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:45:55 Download gff for
BO28791.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8646-RB | 53..1738 | 17..1704 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:45:55 Download gff for
BO28791.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12657284..12657391 | 17..124 | 100 | -> | Plus |
2R | 12657675..12657762 | 285..372 | 100 | -> | Plus |
2R | 12657459..12657618 | 125..284 | 100 | -> | Plus |
2R | 12657816..12658207 | 373..764 | 100 | -> | Plus |
2R | 12658321..12659065 | 765..1509 | 100 | -> | Plus |
2R | 12659124..12659316 | 1510..1704 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:40:51 Download gff for
BO28791.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8545321..8545712 | 373..764 | 100 | -> | Plus |
arm_2R | 8546629..8546821 | 1510..1704 | 98 | | Plus |
arm_2R | 8544789..8544896 | 17..124 | 100 | -> | Plus |
arm_2R | 8544964..8545123 | 125..284 | 100 | -> | Plus |
arm_2R | 8545180..8545267 | 285..372 | 100 | -> | Plus |
arm_2R | 8545826..8546570 | 765..1509 | 100 | -> | Plus |
BO28791.pep Sequence
Translation from 16 to 1720
> BO28791.pep
MWFLWLICLLLPIIDAAEVEKSPAKPNIIFILADDLGFNDVGFHGSAEIP
TPNIDALAYSGIILNRYYVAPICTPSRSALMTGKYPIHTGMQHTVLYAAE
PRGLPLEEKILPQYLNELGYTSHIAGKWHLGHWKLKYTPLYRGFSSHVGF
WSGHQDYNDHTAVENNQWGLDMRNGTQVAYDLHGHYTTDVITDHSVKVIA
NHNATKGPLFLYVAHAACHSSNPYNPLPVPDNDVIKMSHIPNYKRRKFAA
MVSKMDNSVGQIVDQLRKSNMLENSIIIFSSDNGGPAQGFNLNFASNYPL
KGVKNTLWEGGVRAAGLMWSPLLKKSQRVSNQTMHIIDWLPTLLEAAGGQ
PALSNLSKQIDGQSIWRALVQDKASPRLNVLHNIDDIWGSAALSVGDWKL
VKGTNYRGSWDGWYGPAGERDPRLYDWQLVGRSRAGKALEALKMLPSRAD
QQRIRAAATVSCPGQSSQGTSCVATAFSAPCLFHIRDDPCEQYNLAKQYP
EVVNALMTELERFNATAVPPSNKPADPRADPRFWNYTWTNFGDYQNNDLD
TFSGDITLAKTVASFLDH
BO28791.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:33:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8646-PB | 562 | CG8646-PB | 1..562 | 1..562 | 3040 | 100 | Plus |
CG7402-PA | 579 | CG7402-PA | 27..566 | 25..559 | 1107 | 42 | Plus |
CG7408-PD | 585 | CG7408-PD | 34..556 | 25..543 | 1056 | 41.8 | Plus |
CG7408-PC | 585 | CG7408-PC | 34..556 | 25..543 | 1056 | 41.8 | Plus |
CG7408-PB | 585 | CG7408-PB | 34..556 | 25..543 | 1056 | 41.8 | Plus |