BO28815.complete Sequence
1651 bp assembled on 2011-09-19
GenBank Submission: KX795421
> BO28815.complete
GAAGTTATCAGTCGACATGCCATCGCCAACGGGAGTCTTTGTGCTAATGA
TCCTCACCCACCTGAGTTTTGGTTTGGGCCAGGTGCGAAACGAGGACCAG
CTGCTGATGGTTGGCCAGAATGGCGATCTCGACAGCAGCAATCCTGCGAT
TCACCACCAGCAACACCAACAGCACCAACAACACCAGCAGCATCAGCAGC
ACCAGAGCAATCACAATCTGAACAACGGGAACATGAACAGCACGATACTG
AATACACTGATGGGAAACAATGCTGGTCAGGTGGTGAACAGTTCCCCGGG
TGGCGGCGGATCCATGATCAACCAATTGGGCAGCAGTACATCGAGTGTAC
CCTCGGTGATTGGAGGCGGCGTGGGGTCCGTGGGAAACCCCTGGCATTCG
GCAGTCGGACTCGGAGTTCCTGGCAACGGAATGGGGCTACCATCGAGCCA
CGGTCTCGGCGGCAACATGGGCTCCCATCCTCATGGACACGCTCTGGCTG
GACTGGCCAAATTGGGCATCATAGTGCCGGGCGGCCAAGGATTACCTGGG
AATCTGGGATACGGCGGGACCATGCTGAACGGCGGAGGAGTTGGAGGTGC
TGCCGGAATGGGCCTAGGAATCGGCTCCAACACTAATAACATGGATATGC
AGCAAGGCCTTTACAACGAACACTTCATTTCGGAGCACACGGTGATGGCG
GTGTTCACTTCGCAGGGCCAAGTGGGTGGACCCTGCAGATACATGCCTGC
CACGCGGCGTCAGAACCACCAGTGTCGCAAGGAGACGGGATTGCCGGGAA
CCCTTAGCGAGGCCCGCCGTCTGGCCACCACCCACTGCGAGGAACAGTTC
CGCTACGACCGCTGGAACTGCTCGATCGAGACGCGCGGAAAGCGGAACAT
CTTCAAGAAGCTCTACAAGGAGACTGCCTTCGTCCACGCGCTCACAGCGG
CCGCCATGACCCACTCGATAGCCAGGGCCTGTGCCGAGGGACGTATGACC
AAGTGCAGCTGCGGGCCAAAAAAGCACAACAGGGAGGCGCAGGACTTCCA
GTGGGGCGGCTGCAATGACAATCTGAAGCACGGCAAGCGGGTGACACGCA
GCTTCCTGGACTTGCGCGGTGGTGATGGTGACGAGGTCAGCGAGATATTG
CGACATGACTCAGAGGTCGGCATCGAAGCTGTCTCCTCGCAGATGATGGA
CAAGTGCAAGTGCCACGGCGTCTCCGGCTCCTGTTCGATGAAAACTTGCT
GGAAGAAGATGGCCGACTTCAATGCCACAGCCACGCTCTTGAGGCAAAAG
TACAACGAGGCCATTCGCAAGGCGCCAAACCAGCGATCAATGCGACAGGT
GTCATCGAGTCGCATGAAAAAACCAAAGCAGCGACGCAAGAAACCCCAAC
AATCGCAATACACCACGCTGTACTATTTGGAGACCTCGCCCTCCTACTGC
GCGGTCACCAAGGATCGGCAGTGCCTGCATCCGGACAACTGTGGCACCCT
GTGCTGTGGGCGTGGCTACACCACCCAGGTGGTTAAGCAGGTGGAGAAGT
GCCGGTGCCGGTTCAACAATGGACGGTGCTGTCAGCTGATCTGCGACTAC
TGCCAGCGGCTGGAGAACAAATACTTTTGTAAAGCAAGCTTTCTAGACCA
T
BO28815.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:37:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Wnt4-RB | 1620 | CG4698-PB | 1..1617 | 17..1633 | 8085 | 100 | Plus |
| Wnt4-RA | 1620 | CG4698-PA | 1..1617 | 17..1633 | 8085 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:37:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Wnt4-RB | 2938 | CG4698-RB | 1163..2779 | 17..1633 | 8085 | 100 | Plus |
| Wnt4-RA | 3367 | CG4698-RA | 1163..2779 | 17..1633 | 8085 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 13:37:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7275360..7276009 | 666..17 | 3250 | 100 | Minus |
| 2L | 23513712 | 2L | 7256760..7257260 | 1167..667 | 2505 | 100 | Minus |
| 2L | 23513712 | 2L | 7256007..7256246 | 1633..1394 | 1200 | 100 | Minus |
| 2L | 23513712 | 2L | 7256460..7256689 | 1393..1164 | 1150 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 13:37:09 has no hits.
BO28815.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-19 10:42:36 Download gff for
BO28815.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wnt4-RA | 1160..2776 | 17..1635 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:52:26 Download gff for
BO28815.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wnt4-RA | 1160..2776 | 17..1635 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:22:38 Download gff for
BO28815.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Wnt4-RA | 1163..2779 | 17..1635 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:22:38 Download gff for
BO28815.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7256005..7256246 | 1394..1635 | 99 | <- | Minus |
| 2L | 7256460..7256687 | 1166..1393 | 100 | <- | Minus |
| 2L | 7256762..7257260 | 667..1165 | 100 | <- | Minus |
| 2L | 7275360..7276009 | 17..666 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:52:26 Download gff for
BO28815.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7256005..7256246 | 1394..1635 | 99 | <- | Minus |
| arm_2L | 7256460..7256687 | 1166..1393 | 100 | <- | Minus |
| arm_2L | 7256762..7257260 | 667..1165 | 100 | <- | Minus |
| arm_2L | 7275360..7276009 | 17..666 | 100 | | Minus |
BO28815.pep Sequence
Translation from 16 to 1651
> BO28815.pep
MPSPTGVFVLMILTHLSFGLGQVRNEDQLLMVGQNGDLDSSNPAIHHQQH
QQHQQHQQHQQHQSNHNLNNGNMNSTILNTLMGNNAGQVVNSSPGGGGSM
INQLGSSTSSVPSVIGGGVGSVGNPWHSAVGLGVPGNGMGLPSSHGLGGN
MGSHPHGHALAGLAKLGIIVPGGQGLPGNLGYGGTMLNGGGVGGAAGMGL
GIGSNTNNMDMQQGLYNEHFISEHTVMAVFTSQGQVGGPCRYMPATRRQN
HQCRKETGLPGTLSEARRLATTHCEEQFRYDRWNCSIETRGKRNIFKKLY
KETAFVHALTAAAMTHSIARACAEGRMTKCSCGPKKHNREAQDFQWGGCN
DNLKHGKRVTRSFLDLRGGDGDEVSEILRHDSEVGIEAVSSQMMDKCKCH
GVSGSCSMKTCWKKMADFNATATLLRQKYNEAIRKAPNQRSMRQVSSSRM
KKPKQRRKKPQQSQYTTLYYLETSPSYCAVTKDRQCLHPDNCGTLCCGRG
YTTQVVKQVEKCRCRFNNGRCCQLICDYCQRLENKYFCKASFLDH
BO28815.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:02:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Wnt4-PB | 539 | CG4698-PB | 1..539 | 1..539 | 2936 | 100 | Plus |
| Wnt4-PA | 539 | CG4698-PA | 1..539 | 1..539 | 2936 | 100 | Plus |
| Wnt2-PA | 352 | CG1916-PA | 14..352 | 220..539 | 472 | 32.1 | Plus |
| Wnt2-PB | 325 | CG1916-PB | 3..325 | 240..539 | 469 | 32.4 | Plus |
| Wnt10-PB | 483 | CG4971-PB | 76..473 | 240..529 | 438 | 28 | Plus |
