BO28919.complete Sequence
550 bp assembled on 2011-08-24
GenBank Submission: KX795689
> BO28919.complete
GAAGTTATCAGTCGACATGCCACACGTGAGATTTGGCTACAATGGAAAGC
CAGGAGCACCAAGAACGGGTATGATAACCGCACTTGAGGTAAAGAAATGC
CTCAATATAACAATCCTAAAAAATTTGAATAAAAAAAAGTTATTGGGTGT
TTGGTTTGCATACGCAACAACACCTGTCAATATACCCGCCTACAAACGTC
GTTGTTCATCGTATAATGTTCAGGATAGTACCTTTTTCGATACCCATATC
GTGTATACGGACTACAAGCACGTGACTGTCACCTATGACTGCAAGTACAA
CGATATGACCATGCTGCATGACCTTAAAGTCCGCGTTTTAACACGCACTC
GAACCCCTGTGCTCAAAGATTTAAACCAGGCCTTATACTTTCTAGAGGAA
CATGCATTTTCAATCAAAAACTTGGATTTCCTCAAGTCAAAAGCATTCTG
CTTTGAGTGGTACGTGTTGAAATACCACTCCAAAACACGACCGGGTCGAT
TCAATGCGCCCATCATCCGGGTTTGGGATCATGCAAGCTTTCTAGACCAT
BO28919.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:09:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43050-RA | 519 | CG43050-PA | 1..516 | 17..532 | 2580 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:09:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43050-RA | 1119 | CG43050-RA | 203..718 | 17..532 | 2580 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:09:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13120158..13120366 | 324..532 | 1045 | 100 | Plus |
| 2L | 23513712 | 2L | 13119996..13120092 | 231..327 | 470 | 99 | Plus |
| 2L | 23513712 | 2L | 13119843..13119935 | 138..230 | 465 | 100 | Plus |
| 2L | 23513712 | 2L | 13119696..13119783 | 52..139 | 440 | 100 | Plus |
| 2L | 23513712 | 2L | 13119496..13119533 | 17..54 | 190 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:09:19 has no hits.
BO28919.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:34:59 Download gff for
BO28919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43050-RA | 203..718 | 17..534 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:53:33 Download gff for
BO28919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43050-RA | 203..718 | 17..534 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:12:25 Download gff for
BO28919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43050-RA | 203..718 | 17..534 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:12:25 Download gff for
BO28919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13120158..13120366 | 324..534 | 99 | | Plus |
| 2L | 13119496..13119532 | 17..53 | 100 | -> | Plus |
| 2L | 13119698..13119783 | 54..139 | 100 | -> | Plus |
| 2L | 13119845..13119935 | 140..230 | 100 | -> | Plus |
| 2L | 13119996..13120088 | 231..323 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:53:33 Download gff for
BO28919.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13119496..13119532 | 17..53 | 100 | -> | Plus |
| arm_2L | 13119698..13119783 | 54..139 | 100 | -> | Plus |
| arm_2L | 13119845..13119935 | 140..230 | 100 | -> | Plus |
| arm_2L | 13119996..13120088 | 231..323 | 100 | -> | Plus |
| arm_2L | 13120158..13120366 | 324..534 | 99 | | Plus |
BO28919.pep Sequence
Translation from 16 to 550
> BO28919.pep
MPHVRFGYNGKPGAPRTGMITALEVKKCLNITILKNLNKKKLLGVWFAYA
TTPVNIPAYKRRCSSYNVQDSTFFDTHIVYTDYKHVTVTYDCKYNDMTML
HDLKVRVLTRTRTPVLKDLNQALYFLEEHAFSIKNLDFLKSKAFCFEWYV
LKYHSKTRPGRFNAPIIRVWDHASFLDH
BO28919.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:22:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43050-PA | 172 | CG43050-PA | 1..172 | 1..172 | 936 | 100 | Plus |
