BO28923.complete Sequence
457 bp assembled on 2011-08-24
GenBank Submission: KX796525
> BO28923.complete
GAAGTTATCAGTCGACATGTCGAATTATAGGGTTACATATAAAAATCGAT
GCATTAGCTGTGGCGTCGAAGTACCAGTCCTTTCCACAAATGGATGCCAT
TTCAAAGTTCAGGACAAATTTAATTCTTGTGGCTCCAAAATAAGCAATCC
TCGAAAACGGCCGAGTCAAATAAAAAGGCACAGGAATATTTCTCAAAGAA
AGCTAAATAATGGTTTTAAATGGTCTTCATCATCTACGAAAAAACGATTC
TATCCGTTAGTAAAGAAACAAAAATTGTTGATGTCCTCAGAGCCCTCTCA
TAAGGCTCTAATTTTAAGAGAGATGATTAGGTTAGGAAGAAAACCGAATC
GAAAGTTCGAAAAGGCTGCGAGAAATAGTGTATTTCCGGGCATCTGCCGT
ACGATATTGAAACTGCACCAGTATACTAATCTTGTACAGGCAAGCTTTCT
AGACCAT
BO28923.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:58:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42847-RA | 426 | CG42847-PA | 1..423 | 17..439 | 2115 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:58:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42847-RA | 817 | CG42847-RA | 153..576 | 16..439 | 2120 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:58:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 9428022..9428396 | 16..390 | 1875 | 100 | Plus |
2L | 23513712 | 2L | 9428449..9428499 | 389..439 | 255 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 06:58:36 has no hits.
BO28923.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:34:55 Download gff for
BO28923.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42847-RA | 112..534 | 17..441 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:01:02 Download gff for
BO28923.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42847-RA | 154..576 | 17..441 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:59:36 Download gff for
BO28923.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42847-RA | 154..576 | 17..441 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:59:36 Download gff for
BO28923.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 9428023..9428395 | 17..389 | 100 | -> | Plus |
2L | 9428450..9428499 | 390..441 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:01:02 Download gff for
BO28923.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 9428023..9428395 | 17..389 | 100 | -> | Plus |
arm_2L | 9428450..9428499 | 390..441 | 96 | | Plus |
BO28923.pep Sequence
Translation from 16 to 457
> BO28923.pep
MSNYRVTYKNRCISCGVEVPVLSTNGCHFKVQDKFNSCGSKISNPRKRPS
QIKRHRNISQRKLNNGFKWSSSSTKKRFYPLVKKQKLLMSSEPSHKALIL
REMIRLGRKPNRKFEKAARNSVFPGICRTILKLHQYTNLVQASFLDH
BO28923.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:22:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42847-PA | 141 | CG42847-PA | 1..141 | 1..141 | 743 | 100 | Plus |