BO28928.complete Sequence
493 bp assembled on 2011-08-24
GenBank Submission: KX800061
> BO28928.complete
GAAGTTATCAGTCGACATGGCAGTCGAGGAATTAGAGAGCAAAATTGTCC
AACTGTTCGTAGAGAACCCCCTCCTGCGCTACGGTGCTGTTGGTCTGTGC
GCCATCTACCTGATCTTTGGCTGGGGCGCCCAACTACTGTGCAACATCAT
TGGGGTTCTGTACCCTGCATATATTTCCATCCATGCCATCGAGTCCAGCA
CAAAGCAGGACGACACCAAGTGGCTGATCTACTGGGTCACGTTTGGAATC
TTCACCGTGATTGAATTCTTTTCGAGTCTGCTAACTTCGGTGATTCCCTT
TTACTGGCTGCTGAAGTGTGCTTTCCTCATCTGGTGCATGCTGCCCACGG
AACAGAATGGTTCTACCATCATCTACAACAAGCTGGTGCGACCCTACTTC
CTGAAACATCACGAATCCGTTGACAGGATCATCGATGATGGCATGAAGAA
AGCCGCTGGAGTGCTGAAGCATGACGCAAGCTTTCTAGACCAT
BO28928.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:13:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8331-RC | 462 | CG8331-PC | 1..459 | 17..475 | 2295 | 100 | Plus |
CG8331-RD | 537 | CG8331-PD | 142..534 | 83..475 | 1965 | 100 | Plus |
CG8331-RB | 483 | CG8331-PB | 88..480 | 83..475 | 1965 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:13:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8331-RC | 1023 | CG8331-RC | 370..830 | 15..475 | 2305 | 100 | Plus |
CG8331-RD | 846 | CG8331-RD | 261..653 | 83..475 | 1965 | 100 | Plus |
CG8331-RB | 877 | CG8331-RB | 292..684 | 83..475 | 1965 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:13:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 14172289..14172522 | 83..316 | 1170 | 100 | Plus |
3R | 32079331 | 3R | 25786726..25787057 | 429..98 | 1090 | 88.6 | Minus |
2R | 25286936 | 2R | 14172582..14172683 | 315..416 | 510 | 100 | Plus |
2R | 25286936 | 2R | 14172158..14172228 | 15..85 | 355 | 100 | Plus |
2R | 25286936 | 2R | 14172747..14172805 | 417..475 | 295 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:13:15 has no hits.
BO28928.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:35:03 Download gff for
BO28928.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8331-RC | 8..466 | 17..477 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:55:17 Download gff for
BO28928.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8331-RC | 372..830 | 17..477 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:13:55 Download gff for
BO28928.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG8331-RC | 372..830 | 17..477 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:13:55 Download gff for
BO28928.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 14172290..14172522 | 84..316 | 100 | -> | Plus |
2R | 14172584..14172683 | 317..416 | 100 | -> | Plus |
2R | 14172747..14172805 | 417..477 | 96 | | Plus |
2R | 14172160..14172226 | 17..83 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:55:17 Download gff for
BO28928.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 10059795..10060027 | 84..316 | 100 | -> | Plus |
arm_2R | 10060089..10060188 | 317..416 | 100 | -> | Plus |
arm_2R | 10060252..10060310 | 417..477 | 96 | | Plus |
arm_2R | 10059665..10059731 | 17..83 | 100 | -> | Plus |
BO28928.pep Sequence
Translation from 16 to 493
> BO28928.pep
MAVEELESKIVQLFVENPLLRYGAVGLCAIYLIFGWGAQLLCNIIGVLYP
AYISIHAIESSTKQDDTKWLIYWVTFGIFTVIEFFSSLLTSVIPFYWLLK
CAFLIWCMLPTEQNGSTIIYNKLVRPYFLKHHESVDRIIDDGMKKAAGVL
KHDASFLDH
BO28928.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:22:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG8331-PC | 153 | CG8331-PC | 1..153 | 1..153 | 812 | 100 | Plus |
CG8331-PB | 160 | CG8331-PB | 27..160 | 20..153 | 707 | 98.5 | Plus |
CG8331-PD | 178 | CG8331-PD | 48..178 | 23..153 | 706 | 100 | Plus |
CG8331-PA | 178 | CG8331-PA | 48..178 | 23..153 | 706 | 100 | Plus |
CG4960-PB | 174 | CG4960-PB | 33..174 | 2..153 | 536 | 69.1 | Plus |