BO28929.complete Sequence
397 bp assembled on 2011-08-24
GenBank Submission: KX799779
> BO28929.complete
GAAGTTATCAGTCGACATGCAGCTGAGTATTATAGTATTGCTCTTGTGCT
CGGTGGTTGTTGCAAATTCACTTGCCCCAAGTCAACTGGCATCGAAAACC
CCATCACCCAATGTAAGCAAGGATCAGCCGTCATCCAGGGAGGAGAAACC
CAGTTTGAAACCGTGCAAACCCATCGAGACTGTGAGTTCAGAGCCAAAAG
GACTAGGCAATACTCCTAAAGTCGGTTCAATTACTCCGGAATCAGCTAAA
ACGTCTGGCACAACCGTGGATAAAAGTCTGGATGATTGCGAACCCATTCC
CGAGGGTATTGGATCTCGATTGAATGCGAGAACTCTTCAAACACTGGTTA
TAAAAAATAATAATAACCCTCTTTTTAATGCAAGCTTTCTAGACCAT
BO28929.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:13:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43093-RA | 366 | CG43093-PA | 1..363 | 17..379 | 1815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:13:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43093-RA | 476 | CG43093-RA | 4..366 | 17..379 | 1815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:13:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 22769885..22770235 | 379..29 | 1755 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 16:13:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
gypsy5 | 7369 | gypsy5 GYPSY5 7369bp | 5929..5965 | 329..365 | 113 | 78.4 | Plus |
BO28929.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:35:04 Download gff for
BO28929.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43093-RA | 4..366 | 17..381 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:55:21 Download gff for
BO28929.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43093-RA | 4..366 | 17..381 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:13:59 Download gff for
BO28929.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43093-RA | 4..366 | 17..381 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:13:59 Download gff for
BO28929.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 22769882..22770235 | 29..381 | 99 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:55:21 Download gff for
BO28929.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18595604..18595957 | 29..381 | 99 | <- | Minus |
BO28929.pep Sequence
Translation from 16 to 397
> BO28929.pep
MQLSIIVLLLCSVVVANSLAPSQLASKTPSPNVSKDQPSSREEKPSLKPC
KPIETVSSEPKGLGNTPKVGSITPESAKTSGTTVDKSLDDCEPIPEGIGS
RLNARTLQTLVIKNNNNPLFNASFLDH
BO28929.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:22:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43093-PA | 121 | CG43093-PA | 1..121 | 1..121 | 612 | 100 | Plus |