BO28931.complete Sequence
367 bp assembled on 2011-08-24
GenBank Submission: KX798803
> BO28931.complete
GAAGTTATCAGTCGACATGAAATTACTCTCTGCGGTTCTTCTAATAGGTA
CCTTAAGTGCCATTTGTCTTGGCCAAAAGGAACCCATATGCAGGTCTGAT
CCGAGTGTTGTCGGAAATTGTGGGCATAAAATTAAAGGGTATACCTATGA
AGTTCGAAAAAATAATTGCAAGAAGTTCCGGGCGATGGCCTGTAAGGTAA
CTGGAAACTTTTTCCGTAGCAGGGATGCGTGCAATGCGAAGTGCAAGGAC
ACCAGGAAGCCAGCTCAAAGCGGAGTCATTGAATTCTTCAGTCGAACGGT
GTCGCAGTTTCTGCAGATGATCTTAAGCCTAATGAGTTGGGCCGGATTTG
CAAGCTTTCTAGACCAT
BO28931.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:15:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42463-RB | 336 | CG42463-PB | 1..333 | 17..349 | 1665 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:15:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42463-RB | 384 | CG42463-RB | 15..347 | 17..349 | 1665 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:15:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 3668728..3668993 | 349..84 | 1330 | 100 | Minus |
2L | 23513712 | 2L | 3669054..3669120 | 83..17 | 335 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:15:22 has no hits.
BO28931.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:35:05 Download gff for
BO28931.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42463-RB | 15..347 | 17..351 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:56:09 Download gff for
BO28931.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42463-RB | 15..347 | 17..351 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:14:46 Download gff for
BO28931.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42463-RB | 15..347 | 17..351 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:14:46 Download gff for
BO28931.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 3668725..3668993 | 84..351 | 99 | <- | Minus |
2L | 3669054..3669120 | 17..83 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:56:09 Download gff for
BO28931.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 3668725..3668993 | 84..351 | 99 | <- | Minus |
arm_2L | 3669054..3669120 | 17..83 | 100 | | Minus |
BO28931.pep Sequence
Translation from 16 to 367
> BO28931.pep
MKLLSAVLLIGTLSAICLGQKEPICRSDPSVVGNCGHKIKGYTYEVRKNN
CKKFRAMACKVTGNFFRSRDACNAKCKDTRKPAQSGVIEFFSRTVSQFLQ
MILSLMSWAGFASFLDH
BO28931.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:22:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42463-PB | 111 | CG42463-PB | 1..111 | 1..111 | 585 | 100 | Plus |
Sfp24Bc-PA | 100 | CG42602-PA | 5..78 | 7..78 | 180 | 43.2 | Plus |
Sfp24Ba-PA | 121 | CG42461-PA | 6..75 | 8..77 | 174 | 45.7 | Plus |
Sfp24Bb-PA | 110 | CG42462-PA | 7..97 | 13..97 | 148 | 35.2 | Plus |
CG16712-PB | 82 | CG16712-PB | 1..82 | 1..78 | 133 | 35.4 | Plus |