BO28932.complete Sequence
898 bp assembled on 2011-08-24
GenBank Submission: KX795139
> BO28932.complete
GAAGTTATCAGTCGACATGAATAAAATGGAAGAAAACTTCTACAATGGAT
GCACTTGTTGCCATTGCTCTTGCCGCCGCTCTTGCTCTTGCTCGTCTTTA
AAACGATGCAATTCCGCTGAATCGTGTCGCTTACTTATTCAGAAAAGTTC
GAAATATATATACGATGGCGTTAGATGCTCAGATCTCAGATGTCCATACT
GCAACGAAGCGCTTGGACAGAAAATCCTTTTATCGCACTCGGCGGAGTCC
ACTGCTCGAACGCCACAACAAACGCGGATTTCCGACATACAGTTTAGTCA
TTCGGATAAAGGACGAAAAAGTTACAGTAAAATGAAATCGATGTCCGGAT
TTGAAGAGCCTAAAGATCAAGTTCAATATAAGAAGAGAGAGTCTAGCATA
TCAACACCATTCAGTTGCTATAGGGAGGATTCGCCAAGGTCCTCGTCCAG
AGTTAAGTCTACCGGAAAGTACAGTTGCAACTGCTTCACAAAGGAACAGC
CAAGAAAGTATGTTTCAAAGACTGCCGAAGAAATCAGAAGGACGGTTCGA
GCGGAGATTGCAGAGATGGAGCAAAAGCAGGCAATGGCAGACAAAAATGG
ATGTGATTTTACTTTTTGCAAGCCACCGCAGAGTGGACGATTGTCATCTA
ATGAAGAAACCAAGAGTAAATCTAAAGATGAAGAGATTTTTACGGAGTCC
GAGAAATTGATACTTAGCAAAATTGATTGGCGTACTACTGCCACCAATGA
TTTGTCTAATTCCGAGGTAATTTATTCGACGATAAAGCGCTTGCTGCGCG
TATGTCTGAACAACAAGATAATCGAACTTGGGCTCCTGGATAGTCTGCAT
GATGCGATAGCACAATTCAAACGAGACAACGCAAGCTTTCTAGACCAT
BO28932.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:15:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43077-RA | 867 | CG43077-PA | 1..864 | 17..880 | 4320 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:15:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43077-RA | 1000 | CG43077-RA | 67..930 | 17..880 | 4320 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:15:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 17067374..17067977 | 880..277 | 3020 | 100 | Minus |
X | 23542271 | X | 17068131..17068304 | 277..104 | 870 | 100 | Minus |
X | 23542271 | X | 17068371..17068457 | 103..17 | 435 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:15:52 has no hits.
BO28932.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:35:06 Download gff for
BO28932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43077-RA | 67..930 | 17..882 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:56:21 Download gff for
BO28932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43077-RA | 67..930 | 17..882 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:15:00 Download gff for
BO28932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43077-RA | 67..930 | 17..882 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:15:00 Download gff for
BO28932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 17067372..17067976 | 278..882 | 99 | <- | Minus |
X | 17068131..17068304 | 104..277 | 100 | <- | Minus |
X | 17068371..17068457 | 17..103 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:56:21 Download gff for
BO28932.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 16961405..16962009 | 278..882 | 99 | <- | Minus |
arm_X | 16962164..16962337 | 104..277 | 100 | <- | Minus |
arm_X | 16962404..16962490 | 17..103 | 100 | | Minus |
BO28932.pep Sequence
Translation from 16 to 898
> BO28932.pep
MNKMEENFYNGCTCCHCSCRRSCSCSSLKRCNSAESCRLLIQKSSKYIYD
GVRCSDLRCPYCNEALGQKILLSHSAESTARTPQQTRISDIQFSHSDKGR
KSYSKMKSMSGFEEPKDQVQYKKRESSISTPFSCYREDSPRSSSRVKSTG
KYSCNCFTKEQPRKYVSKTAEEIRRTVRAEIAEMEQKQAMADKNGCDFTF
CKPPQSGRLSSNEETKSKSKDEEIFTESEKLILSKIDWRTTATNDLSNSE
VIYSTIKRLLRVCLNNKIIELGLLDSLHDAIAQFKRDNASFLDH
BO28932.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:22:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43077-PA | 288 | CG43077-PA | 1..288 | 1..288 | 1516 | 100 | Plus |