BO28979.complete Sequence
1042 bp assembled on 2011-08-24
GenBank Submission: KX798737
> BO28979.complete
GAAGTTATCAGTCGACATGGGTCGCAGTAAGGTGTTAAGAAAGAAGCAAT
CTAGCAAGAAGCGACGACATACAATTGATCAAGAAAATACAGACGATTAT
TATATGACACCCGAAGAAGTACGGCAATCGGTTGAGCGGTGGTCATTCCT
TTGGCACTGTAGTGATTCTGATTCTGATTCTAATTCCGAATCGGAGAGCA
GTTCAACGTCATCATTGTTGCAACATGATCCATCTCTGTATGGAGACTGG
CGTGTGCGGGGTGAAGAATTCAAATTAGAGACTACCGGCAAGGAAATGCT
GATGAATTTAAGCAAATTTCCCTTTCCGGAGATAATCAAACCACCCGTTT
TGCTGGATACTAAGTTGCCCAAAACCCTGCGGGTTAATCACTGGCCCTAT
ATTACACACAAAATTTTCGACTACGTAATGCCGGACATATATTTTCGGTC
CATGGAGTTCATGAAGAAACCCGTATGTGAGGGAGCCGTGGGTTATGATC
CTTTGTACTATGGCTCATCAATTTTGATCAAACCTCTGTGCAAGTACAGT
AAGCCACGCAATTTTTCACCCACATGGACCAATACTAGCTTGGTGTCCTG
GATAGATGGGCGTCGTTTTGCCAAGATGGTGAAACGTAATGACTCGCAGA
TGGGTAATGAGAAGCTACTTCGGTGGACTAAGGTTCGCCCGTTTTGGAGC
AATAAACTCCTGGCTGGACTTAGAAAGGACCCGGACGCTAAACTAATTGT
AAGGTGGAAGCGTCCCAGGACAAGATTTTCTTTTAATCCGGAATCCGATG
CGATGGACAAACAATGGGATATGCCCGAGGAGGACCCGTTGCCATCGGAT
GAGTTTTACGTAGAATATGTAATGAATGATGATCCCGAAACACAACGATC
ATGGAACTCCTCGTTGTCTGACGATTCTATGCCGGGAATAACTAAATCCC
AGTCTGATCTCAATCTCGAATATTTAAAGATAAGGCCGATATTAAGACGT
TGTCATAGTTCGAGCAGTCTTTTTGCAAGCTTTCTAGACCAT
BO28979.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:25:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32720-RB | 1011 | CG32720-PB | 1..1008 | 17..1024 | 5040 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:25:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32720-RB | 1335 | CG32720-RB | 71..1078 | 17..1024 | 5040 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:24:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 7535882..7536889 | 1024..17 | 5040 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 16:25:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
transib2 | 2844 | transib2 TRANSIB2 2844bp | 2539..2571 | 165..197 | 120 | 84.8 | Plus |
BO28979.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:35:21 Download gff for
BO28979.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32720-RB | 1..1008 | 17..1026 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:00:25 Download gff for
BO28979.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32720-RB | 71..1078 | 17..1026 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:18:32 Download gff for
BO28979.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32720-RB | 71..1078 | 17..1026 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:18:32 Download gff for
BO28979.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 7535880..7536889 | 17..1026 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:00:25 Download gff for
BO28979.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 7429913..7430922 | 17..1026 | 99 | | Minus |
BO28979.pep Sequence
Translation from 16 to 1042
> BO28979.pep
MGRSKVLRKKQSSKKRRHTIDQENTDDYYMTPEEVRQSVERWSFLWHCSD
SDSDSNSESESSSTSSLLQHDPSLYGDWRVRGEEFKLETTGKEMLMNLSK
FPFPEIIKPPVLLDTKLPKTLRVNHWPYITHKIFDYVMPDIYFRSMEFMK
KPVCEGAVGYDPLYYGSSILIKPLCKYSKPRNFSPTWTNTSLVSWIDGRR
FAKMVKRNDSQMGNEKLLRWTKVRPFWSNKLLAGLRKDPDAKLIVRWKRP
RTRFSFNPESDAMDKQWDMPEEDPLPSDEFYVEYVMNDDPETQRSWNSSL
SDDSMPGITKSQSDLNLEYLKIRPILRRCHSSSSLFASFLDH
BO28979.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:23:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32720-PB | 336 | CG32720-PB | 1..336 | 1..336 | 1815 | 100 | Plus |