BO28983.complete Sequence
361 bp assembled on 2011-08-24
GenBank Submission: KX796984
> BO28983.complete
GAAGTTATCAGTCGACATGATCAAGTTTTTTGCCGTGGTTGTCTTGCTGG
CCATAAGTCCGCTATCGTCTGATTCTACTCTAATTGACATTGTGTCTAGT
TGTATAAATTTTCAGTTTAAGGCATTACTATACCTTGCGGAATCAACTGA
TGATAAATTTCATTGTATTGAAACATGTGTATATGATATTATCAGAAATC
TTACAAAGATTGATCTACCTAAACGCCCGGATCCCGAAATATGTCAAGGC
TTAAATGACAAATGTAAGTACGCCGAAGGATTACGAAAGTGTCTTCCACC
AAATTTAGATGAAAGATTTTGGAAAGATGTTTTTACACGAATAGCAAGCT
TTCTAGACCAT
BO28983.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:22:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43101-RA | 330 | CG43101-PA | 1..327 | 17..343 | 1635 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:22:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43101-RA | 405 | CG43101-RA | 24..350 | 17..343 | 1635 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:22:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 15013102..15013362 | 343..83 | 1305 | 100 | Minus |
2R | 25286936 | 2R | 15013434..15013499 | 82..17 | 330 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:22:24 has no hits.
BO28983.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:35:17 Download gff for
BO28983.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43101-RA | 1..327 | 17..345 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:59:12 Download gff for
BO28983.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43101-RA | 24..350 | 17..345 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:17:29 Download gff for
BO28983.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43101-RA | 24..350 | 17..345 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:17:29 Download gff for
BO28983.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 15013100..15013362 | 83..345 | 99 | <- | Minus |
2R | 15013434..15013499 | 17..82 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:59:12 Download gff for
BO28983.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 10900605..10900867 | 83..345 | 99 | <- | Minus |
arm_2R | 10900939..10901004 | 17..82 | 100 | | Minus |
BO28983.pep Sequence
Translation from 16 to 361
> BO28983.pep
MIKFFAVVVLLAISPLSSDSTLIDIVSSCINFQFKALLYLAESTDDKFHC
IETCVYDIIRNLTKIDLPKRPDPEICQGLNDKCKYAEGLRKCLPPNLDER
FWKDVFTRIASFLDH
BO28983.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:23:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43101-PA | 109 | CG43101-PA | 1..109 | 1..109 | 577 | 100 | Plus |