BO28984.complete Sequence
280 bp assembled on 2011-08-24
GenBank Submission: KX797850
> BO28984.complete
GAAGTTATCAGTCGACATGCTTTTGGGCATGGCCATCGCTTTTCCCACTC
ATCAGTTCGTGCCACACATACCTTATGGCATGGATGACTTTTACCCGTTT
CTTGCCAGAAATTCCACCGATGTGCTGCCGTTGTCTACAAATCTAACTCA
AATTGAACGACTAGGATGGGCCGATAAATGTGTGCAGTTTAGAAATAAGT
GCACATTAGCAGAGCATTGTTGCAGTCTTAGATGCCTGAAACGTATTTAT
CGATGCATTACCGCAAGCTTTCTAGACCAT
BO28984.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:22:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42870-RB | 285 | CG42870-PB | 37..282 | 17..262 | 1230 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:22:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42870-RB | 368 | CG42870-RB | 45..290 | 17..262 | 1230 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:22:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 21737186..21737320 | 151..17 | 675 | 100 | Minus |
3R | 32079331 | 3R | 21737011..21737121 | 262..152 | 555 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:22:42 has no hits.
BO28984.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:35:17 Download gff for
BO28984.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42870-RA | 11..256 | 17..264 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:59:22 Download gff for
BO28984.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42870-RB | 45..290 | 17..264 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:17:36 Download gff for
BO28984.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42870-RB | 45..290 | 17..264 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:17:36 Download gff for
BO28984.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 21737009..21737121 | 152..264 | 98 | <- | Minus |
3R | 21737186..21737320 | 17..151 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:59:22 Download gff for
BO28984.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 17562731..17562843 | 152..264 | 98 | <- | Minus |
arm_3R | 17562908..17563042 | 17..151 | 100 | | Minus |
BO28984.pep Sequence
Translation from 16 to 280
> BO28984.pep
MLLGMAIAFPTHQFVPHIPYGMDDFYPFLARNSTDVLPLSTNLTQIERLG
WADKCVQFRNKCTLAEHCCSLRCLKRIYRCITASFLDH
BO28984.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:23:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42870-PB | 94 | CG42870-PB | 13..94 | 1..82 | 454 | 100 | Plus |