BO28988.complete Sequence
477 bp assembled on 2011-08-24
> BO28988.complete
GAAGTTATCAGTCGACATGAATCATCTGTTCGTGTTAACTTTTATTCTGC
TTTTTGCCTTTGCCTTGGGATCCGAAGGTGAATTGACCGAAATGTGCCAA
CCACAATTAAACAGAAGAGACCTATTCGACATAGCCGTGTTGGCCGCCAT
AAAGGTTCTCATCCGTCAGATTGAGAGCTACAACGAGGATCGGCCTATCT
CTTCAAGCCTGATGGTTCACATTACGACTATGGTCTCCAAGTACATCCTG
ACCGGTAAGAGCGTAAAGTTCATCCTTCGGCTGCTCTATGTGGCATGCCG
TATGAACAAACCGCTGACACAAGAAAATAAAAAACAAGCTCCAGTCCGCA
CAGCATTCTTATGCTTGTTGGAATTGGGCAAAGAAAAGTGCTATACATAC
AAGGAAAAGGCGGAAGGAGACTTCTCTGTGGAGTTGCAAGCAAGCTTTCT
AGACCATTCGTTTGGCCCTTTAACGCG
BO28988.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:27:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43111-RA | 426 | CG43111-PA | 1..423 | 17..439 | 2115 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:27:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43111-RA | 553 | CG43111-RA | 41..463 | 17..439 | 2115 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:27:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 19552162..19552582 | 19..439 | 2105 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:27:17 has no hits.
BO28988.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:35:25 Download gff for
BO28988.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43111-RA | 41..469 | 17..447 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:01:19 Download gff for
BO28988.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43111-RA | 41..469 | 17..447 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:19:30 Download gff for
BO28988.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43111-RA | 41..469 | 17..447 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:19:30 Download gff for
BO28988.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 19552161..19552588 | 17..447 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:01:19 Download gff for
BO28988.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 15439666..15440093 | 17..447 | 98 | | Plus |
BO28988.pep Sequence
Translation from 16 to 475
> BO28988.pep
MNHLFVLTFILLFAFALGSEGELTEMCQPQLNRRDLFDIAVLAAIKVLIR
QIESYNEDRPISSSLMVHITTMVSKYILTGKSVKFILRLLYVACRMNKPL
TQENKKQAPVRTAFLCLLELGKEKCYTYKEKAEGDFSVELQASFLDHSFG
PLT
BO28988.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:23:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43111-PA | 141 | CG43111-PA | 1..141 | 1..141 | 711 | 100 | Plus |