BO28991.complete Sequence
477 bp assembled on 2011-08-24
> BO28991.complete
GAAGTTATCAGTCGACATGTGCTTTTGTCCGACACTTGGTCTCAAAATTG
TACTTTTGTTAGTAATACCTATAACCGCAGGAATTAATGGTGCTCAAATA
GCCAAAGATGTTTCTATATTGAATTTATTAAAGGGATACCATTATATTAT
GCTTATTATAAGCCTATCCCTGTCCGTAGTTATACTGGCGACTCTGGTTC
TTTTAATATATGCGGCGATCTGTAATAAAATTCGAATTCTGAAAGTGATG
ATCTTTGTTTATGTAGCCATCGTCGTGGTGAAACTGATAATTCTGTTCGT
GTGTCTAAGTACTGAATTGAATCCTGACAAGACGACAGCCCATCCCATAT
TTATGATATGCTGGCTCCTTACGTTCTTATGTATGGCCGTTATAATAATA
TACTGGCTTCGGCTACATGACCTTGCCAACGAAGACAATGCAAGCTTTCT
AGACCATTCGTTTGGCGCGCAAAGAGG
BO28991.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:27:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42661-RB | 426 | CG42661-PB | 1..423 | 17..439 | 2115 | 100 | Plus |
CG42661-RA | 426 | CG42661-PA | 1..423 | 17..439 | 2115 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:27:58
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42661-RB | 2597 | CG42661-RB | 536..958 | 17..439 | 2115 | 100 | Plus |
CG42661-RA | 2531 | CG42661-RA | 536..958 | 17..439 | 2115 | 100 | Plus |
CG42660-RB | 2597 | CG42660-RB | 536..958 | 17..439 | 2115 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:27:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 7466401..7466568 | 80..247 | 840 | 100 | Plus |
3L | 28110227 | 3L | 7466625..7466751 | 247..373 | 635 | 100 | Plus |
3L | 28110227 | 3L | 7466818..7466884 | 373..439 | 335 | 100 | Plus |
3L | 28110227 | 3L | 7466286..7466349 | 17..80 | 320 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:27:56 has no hits.
BO28991.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:35:27 Download gff for
BO28991.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Tsp66A-RD | 536..958 | 17..439 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:01:36 Download gff for
BO28991.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42660-RA | 536..958 | 17..439 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:19:46 Download gff for
BO28991.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42660-RB | 536..958 | 17..439 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:19:46 Download gff for
BO28991.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 7466286..7466348 | 17..79 | 100 | -> | Plus |
3L | 7466401..7466568 | 80..247 | 100 | -> | Plus |
3L | 7466626..7466751 | 248..373 | 100 | -> | Plus |
3L | 7466819..7466884 | 374..439 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:01:36 Download gff for
BO28991.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 7459726..7459851 | 248..373 | 100 | -> | Plus |
arm_3L | 7459919..7459984 | 374..439 | 100 | | Plus |
arm_3L | 7459386..7459448 | 17..79 | 100 | -> | Plus |
arm_3L | 7459501..7459668 | 80..247 | 100 | -> | Plus |
BO28991.pep Sequence
Translation from 16 to 475
> BO28991.pep
MCFCPTLGLKIVLLLVIPITAGINGAQIAKDVSILNLLKGYHYIMLIISL
SLSVVILATLVLLIYAAICNKIRILKVMIFVYVAIVVVKLIILFVCLSTE
LNPDKTTAHPIFMICWLLTFLCMAVIIIYWLRLHDLANEDNASFLDHSFG
AQR
BO28991.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:23:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42661-PB | 141 | CG42661-PB | 1..141 | 1..141 | 709 | 100 | Plus |
CG42661-PA | 141 | CG42661-PA | 1..141 | 1..141 | 709 | 100 | Plus |
CG42660-PB | 142 | CG42660-PB | 1..134 | 1..133 | 283 | 45.5 | Plus |
CG42660-PA | 142 | CG42660-PA | 1..134 | 1..133 | 283 | 45.5 | Plus |
CG43292-PA | 142 | CG43292-PA | 1..133 | 1..135 | 147 | 28.1 | Plus |