BO28994.complete Sequence
403 bp assembled on 2011-08-24
GenBank Submission: KX796450
> BO28994.complete
GAAGTTATCAGTCGACATGAAGCTACTGCTGTTGGCGGTGATTGTTGCCC
TCGCTTGGCTTCTTATAGAGGCTGGCAAGACCAGGACTAAGAACAGCTCC
TGTCTGGTGAAAAACAAATATCCCCCCGAATCTTCTTGTAGATCATCGCA
TCGGGAATTCTTTGCCTTTCACCGAGTTCTATTCGACTGCATAAAGGTGA
CCACAAATTGCCGCAAGATCTACAGGAGGAATGAGTTCCATAGTTTGCAA
TCGTGCAGAGATGCATGTCACTACCACATGGCTGAACCAAGTCCGCCACC
ACCCCAAAATGGTACGACTTCTGCACCTGGAGGTGCCTCCGGAGCGCCAG
GAGACGCTCCAGCAGCTGAAACGCCAGCTGCAGCGGCAAGCTTTCTAGAC
CAT
BO28994.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:25:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43057-RB | 372 | CG43057-PB | 1..369 | 17..385 | 1845 | 100 | Plus |
CG43057-RA | 372 | CG43057-PA | 1..369 | 17..385 | 1845 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:25:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43057-RB | 577 | CG43057-RB | 15..384 | 16..385 | 1850 | 100 | Plus |
CG43057-RA | 468 | CG43057-RA | 15..384 | 16..385 | 1850 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:25:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8243516..8243707 | 385..194 | 960 | 100 | Minus |
2L | 23513712 | 2L | 8243757..8243868 | 198..87 | 560 | 100 | Minus |
2L | 23513712 | 2L | 8243913..8243989 | 92..16 | 370 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:25:55 has no hits.
BO28994.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:35:22 Download gff for
BO28994.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43057-RA | 1..369 | 17..387 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:00:46 Download gff for
BO28994.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43057-RA | 16..384 | 17..387 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:18:56 Download gff for
BO28994.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG43057-RA | 16..384 | 17..387 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:18:56 Download gff for
BO28994.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8243513..8243704 | 197..387 | 98 | <- | Minus |
2L | 8243759..8243868 | 87..196 | 100 | <- | Minus |
2L | 8243919..8243988 | 17..86 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:00:46 Download gff for
BO28994.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8243513..8243704 | 197..387 | 98 | <- | Minus |
arm_2L | 8243759..8243868 | 87..196 | 100 | <- | Minus |
arm_2L | 8243919..8243988 | 17..86 | 100 | | Minus |
BO28994.pep Sequence
Translation from 16 to 403
> BO28994.pep
MKLLLLAVIVALAWLLIEAGKTRTKNSSCLVKNKYPPESSCRSSHREFFA
FHRVLFDCIKVTTNCRKIYRRNEFHSLQSCRDACHYHMAEPSPPPPQNGT
TSAPGGASGAPGDAPAAETPAAAASFLDH
BO28994.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:23:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG43057-PB | 123 | CG43057-PB | 1..123 | 1..123 | 661 | 100 | Plus |
CG43057-PA | 123 | CG43057-PA | 1..123 | 1..123 | 661 | 100 | Plus |