BO29005.complete Sequence
481 bp assembled on 2011-08-24
GenBank Submission: KX794264
> BO29005.complete
GAAGTTATCAGTCGACATGATCGAGACACTGTATAACCTGCCCTTCCACA
TCCTGGTGCCGCCGAACATCAAGGTGCGCAGATTCAGCATTCCAATGCCG
TCACCGATGGCCGTTTTCAGTGTGATTTTGTTTTCCTATTTTCTGGTGAC
AGGCGGTATCATATATGACGTGATTGTGGAGCCGCCCAGTCTGGGAGCCA
CGGTGGATGAGCACGGACACTCGCGTCCAGTGGCCTTTATGCCCTACCGT
GTGAATGGGCAGTACATCATGGAGGGCCTGGCCAGCAGCTTCCTGTTCAC
CGTCGGCGGACTGGGATTCATTATCATGGACCAAACGCACACGCCGGGCA
AGACGAACCTCAACCGCCTGCTGCTGACCGCCATGGGATTCATTTTCATC
CTGGTCTCCTTCTTCACCACCTGGCTGTTCATGCGCATGAAGCTGCCCAG
CTACCTGCAGCCCGCAAGCTTTCTAGACCAT
BO29005.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:30:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9662-RB | 450 | CG9662-PB | 1..447 | 17..463 | 2235 | 100 | Plus |
| CG9662-RA | 450 | CG9662-PA | 1..447 | 17..463 | 2235 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:30:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9662-RB | 846 | CG9662-RB | 118..565 | 16..463 | 2240 | 100 | Plus |
| CG9662-RA | 795 | CG9662-RA | 118..565 | 16..463 | 2240 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:30:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3376113..3376421 | 463..155 | 1545 | 100 | Minus |
| 2L | 23513712 | 2L | 3376479..3376620 | 157..16 | 710 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:30:56 has no hits.
BO29005.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:35:32 Download gff for
BO29005.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9662-RA | 68..514 | 17..465 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:02:51 Download gff for
BO29005.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9662-RA | 119..565 | 17..465 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:20:57 Download gff for
BO29005.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9662-RA | 119..565 | 17..465 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:20:57 Download gff for
BO29005.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3376111..3376420 | 156..465 | 99 | <- | Minus |
| 2L | 3376481..3376619 | 17..155 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:02:51 Download gff for
BO29005.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3376481..3376619 | 17..155 | 100 | | Minus |
| arm_2L | 3376111..3376420 | 156..465 | 99 | <- | Minus |
BO29005.pep Sequence
Translation from 16 to 481
> BO29005.pep
MIETLYNLPFHILVPPNIKVRRFSIPMPSPMAVFSVILFSYFLVTGGIIY
DVIVEPPSLGATVDEHGHSRPVAFMPYRVNGQYIMEGLASSFLFTVGGLG
FIIMDQTHTPGKTNLNRLLLTAMGFIFILVSFFTTWLFMRMKLPSYLQPA
SFLDH
BO29005.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:23:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9662-PB | 149 | CG9662-PB | 1..149 | 1..149 | 777 | 100 | Plus |
| CG9662-PA | 149 | CG9662-PA | 1..149 | 1..149 | 777 | 100 | Plus |
