BO29022.complete Sequence
391 bp assembled on 2011-09-14
GenBank Submission: KX793854
> BO29022.complete
GAAGTTATCAGTCGACATGAAAATTACCATTGCAATTCTAGGACTTTTTC
TGGCACTTATTTGCAGCCTGGAATCGCCAACCGCAGCGTGCGATATCCAA
GCAGTTTATAATCAAACCTTAAAGTTCTGCGAAAACAACTTCTTTCTGAA
CATATTCTTGTGCACCGGCTTGTCTTACGGTGTCGGCAACGAGAAATTTG
TTCAGACGCTCCAGTCGCAAAGGAAGATCTTGTGTGCAATACCATTTTTT
GCTGAAATTTGCAAAACCTGCGATTTTTCGACGATTGTCTCAAATGATCA
GAATGCTACGATTTCAAGCGGAAATTCAACTGCAGACGCCACCCGAACTT
TGAAGCTTGCCGATCTGACGCGTGCAAGCTTTCTAGACCAT
BO29022.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:23:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42704-RA | 360 | CG42704-PA | 1..357 | 17..373 | 1785 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:23:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42704-RA | 501 | CG42704-RA | 20..376 | 17..373 | 1785 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:23:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 7412973..7413171 | 175..373 | 980 | 99.5 | Plus |
X | 23542271 | X | 7412816..7412907 | 88..179 | 460 | 100 | Plus |
X | 23542271 | X | 7412687..7412758 | 17..88 | 360 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:23:14 has no hits.
BO29022.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-14 12:00:03 Download gff for
BO29022.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42704-RA | 20..376 | 17..375 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:13:44 Download gff for
BO29022.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42704-RA | 20..376 | 17..375 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:09:36 Download gff for
BO29022.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42704-RA | 20..376 | 17..375 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:09:36 Download gff for
BO29022.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 7412687..7412758 | 17..88 | 100 | -> | Plus |
X | 7412817..7412906 | 89..178 | 100 | -> | Plus |
X | 7412977..7413171 | 179..375 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:13:44 Download gff for
BO29022.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 7306720..7306791 | 17..88 | 100 | -> | Plus |
arm_X | 7306850..7306939 | 89..178 | 100 | -> | Plus |
arm_X | 7307010..7307204 | 179..375 | 98 | | Plus |
BO29022.pep Sequence
Translation from 16 to 391
> BO29022.pep
MKITIAILGLFLALICSLESPTAACDIQAVYNQTLKFCENNFFLNIFLCT
GLSYGVGNEKFVQTLQSQRKILCAIPFFAEICKTCDFSTIVSNDQNATIS
SGNSTADATRTLKLADLTRASFLDH
BO29022.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:15:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG42704-PA | 119 | CG42704-PA | 1..119 | 1..119 | 609 | 100 | Plus |