BO29045.complete Sequence
781 bp assembled on 2011-08-24
GenBank Submission: KX798514
> BO29045.complete
GAAGTTATCAGTCGACATGTTGCCCCACGATAGGAAAATACTTAGGCAAC
ATACACGCCAGAACCAGAATACGAATCGCCGGCGCCCCAGATTCACCAAC
AATAGCTTCCATACCAAAATGGGCAGCAACTCCAAGGCAGACCCCATCTC
GCTGACCTTCCACGACTCCTGCCTGCGGATGTCCGACGTCCAGTTGCTCC
ACGGCCCGCACTGGCTGAACGACCAGATCCTGAGCTTCTACTACGAATAC
CTGGCCCACATGAAGTACAAGACCAATGCGGATCTGCACTTCATTGCGCC
GGAGATTACGCAGTGTATGAAGTACATGGGCGACCAGGAGCTGAAGCAGC
TTCTCGACCAGAGCAACACCACTGGCAAGCCCTTTATCTTCTTCGCGCTG
AACGACAACGAAACCACCGATGCTGGTGGCAGCCACTGGTCACTGTTGGT
CTTCTCGCGTCCGGAGAAGACCTTCTATCACTTCGATTCGTATGGGAACA
ACAACACGGGCAACTCCCTGGAGCTGATGAACAAGATCAAGGACCTGCTT
GGCGTCCGAATGGCCAAATTCCGGCCCATGCGCTGCCTACAGCAGGCGAA
CGGCTACGACTGTGGCATCCATGTTATCTGCATGACCGACCACATTGCCG
ATTACCTAAACAGATACGAGGTGATCGACGGACTGCCGTCGCTGCACATC
GACACCGTGAAGGCGAAGCGCACCGAGCTACTGAAACTCATCCTGTCGCT
GGGCGGCAAGGGCGCAAGCTTTCTAGACCAT
BO29045.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:50:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Den1-RC | 750 | CG8493-PC | 1..747 | 17..763 | 3735 | 100 | Plus |
| Den1-RA | 648 | CG8493-PA | 1..645 | 119..763 | 3225 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:50:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Den1-RC | 1161 | CG8493-RC | 121..867 | 17..763 | 3735 | 100 | Plus |
| Den1-RA | 1257 | CG8493-RA | 245..963 | 45..763 | 3595 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 06:50:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 12338531..12339250 | 44..763 | 3600 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 06:50:55 has no hits.
BO29045.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:34:47 Download gff for
BO29045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Den1-RC | 126..867 | 22..765 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:56:19 Download gff for
BO29045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Den1-RC | 126..867 | 22..765 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:56:01 Download gff for
BO29045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Den1-RC | 126..867 | 22..765 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 07:56:01 Download gff for
BO29045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 12338425..12338448 | 22..45 | 100 | -> | Plus |
| 2R | 12338533..12339250 | 46..765 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:56:19 Download gff for
BO29045.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 8225930..8225953 | 22..45 | 100 | -> | Plus |
| arm_2R | 8226038..8226755 | 46..765 | 99 | | Plus |
BO29045.pep Sequence
Translation from 16 to 781
> BO29045.pep
MLPHDRKILRQHTRQNQNTNRRRPRFTNNSFHTKMGSNSKADPISLTFHD
SCLRMSDVQLLHGPHWLNDQILSFYYEYLAHMKYKTNADLHFIAPEITQC
MKYMGDQELKQLLDQSNTTGKPFIFFALNDNETTDAGGSHWSLLVFSRPE
KTFYHFDSYGNNNTGNSLELMNKIKDLLGVRMAKFRPMRCLQQANGYDCG
IHVICMTDHIADYLNRYEVIDGLPSLHIDTVKAKRTELLKLILSLGGKGA
SFLDH
BO29045.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:22:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Den1-PC | 249 | CG8493-PC | 1..249 | 1..249 | 1343 | 100 | Plus |
| Den1-PA | 215 | CG8493-PA | 1..215 | 35..249 | 1156 | 100 | Plus |
| CG1503-PB | 307 | CG1503-PB | 53..299 | 15..247 | 335 | 33.6 | Plus |
| CG1503-PA | 307 | CG1503-PA | 53..299 | 15..247 | 335 | 33.6 | Plus |
