BO29068.complete Sequence
421 bp assembled on 2011-08-24
GenBank Submission: KX796694
> BO29068.complete
GAAGTTATCAGTCGACATGCGGATCAATCTCATCTACTTCACGCTGCTTT
GGGCATTCTTCTTCTCAACCGAAGTATTTGGAAAGGTTAAAATACGAGAG
TCCGATATACGACGTATAACAAAGATGGGAAGCTACAAGGTACGCCAAGA
AAAATGTTTGTTCATACCCAGCTATGGACGCTGCAAAAAACATATCGCAG
TATATGGCTACAACATTATAACCAATCGATGCTCAGAATTTACCTACAGT
GGCTGCGGGGGGAATCCCAATCGTTTTATGACTGATAGCCAATGTCGAAA
CACTTGCTATGTGGTTCCAGCGAGGAAAACCGTCTCAGAACCGGACTATT
ATGCCGATGACGGTGTCACAGAACCGATGCAAGTGGATGAAGAGGACGAT
TACGCAAGCTTTCTAGACCAT
BO29068.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:29:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31515-RB | 390 | CG31515-PB | 1..387 | 17..403 | 1935 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:29:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31515-RB | 469 | CG31515-RB | 27..414 | 16..403 | 1940 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:29:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 23388428..23388683 | 403..148 | 1280 | 100 | Minus |
| 3R | 32079331 | 3R | 23388739..23388872 | 149..16 | 670 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 16:29:02 has no hits.
BO29068.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:35:29 Download gff for
BO29068.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31515-RB | 28..414 | 17..405 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:02:05 Download gff for
BO29068.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31515-RB | 28..414 | 17..405 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:20:14 Download gff for
BO29068.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31515-RB | 28..414 | 17..405 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:20:14 Download gff for
BO29068.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 23388426..23388681 | 150..405 | 99 | <- | Minus |
| 3R | 23388739..23388871 | 17..149 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:02:05 Download gff for
BO29068.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19214148..19214403 | 150..405 | 99 | <- | Minus |
| arm_3R | 19214461..19214593 | 17..149 | 100 | | Minus |
BO29068.pep Sequence
Translation from 16 to 421
> BO29068.pep
MRINLIYFTLLWAFFFSTEVFGKVKIRESDIRRITKMGSYKVRQEKCLFI
PSYGRCKKHIAVYGYNIITNRCSEFTYSGCGGNPNRFMTDSQCRNTCYVV
PARKTVSEPDYYADDGVTEPMQVDEEDDYASFLDH
BO29068.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:23:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31515-PB | 129 | CG31515-PB | 1..129 | 1..129 | 704 | 100 | Plus |
| CG31609-PB | 123 | CG31609-PB | 24..94 | 40..108 | 178 | 45.1 | Plus |
| CG17380-PB | 119 | CG17380-PB | 17..75 | 39..97 | 155 | 45.8 | Plus |
| CG2816-PB | 84 | CG2816-PB | 22..81 | 38..97 | 133 | 41.7 | Plus |
