Clone BO29077 Report

Search the DGRC for BO29077

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:290
Well:77
Vector:pDNR-Dual
Associated Gene/TranscriptCG42710-RA
Protein status:BO29077.pep: Imported from assembly
Sequenced Size:538

Clone Sequence Records

BO29077.complete Sequence

538 bp assembled on 2011-08-24

GenBank Submission: KX798511

> BO29077.complete
GAAGTTATCAGTCGACATGGAAGAACTTGTAGATCTGGATGAACCTTATC
TGTATATGATTGGCATACCGACTGAACTTCGCGTGCACTGGGCCTACATA
GTTGATTTTCTACGCCCAGAAGAGAATCGTCAACAAATCAACGACCCAAA
TGTGGAATTAGTGCCCCTCTCACAACGGCAATACCGAGAAGAGACTACGG
ACTTGGAAGTGGTGCCCTTACCACAAGAGCCGAGCATTGACCTATCTGGT
GCTGGCGATGGACACCACGTCATTCCCCGGATCGGTGATAACGAAATGCC
GACTGTGATTATCTTTCTGCCCAGAATAATGCCATTACCCTGGTCCAGTT
TAAAGCGTCTGAAGCCGGTGATCATTGCGGCCTCAAATATTCTCTTCAGA
AAGATACTGTCCCATTTTGGAATCGATTTAAATCAAGTCTTTGCCCTCGG
CTTGTCATACAATACCCATTTAACAATATTTCACTGCTTTATGGAATACC
TTACATCCTGGATAACTGGGGCAAGCTTTCTAGACCAT

BO29077.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:29:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG42710-RA 507 CG42710-PA 1..504 17..520 2520 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:30:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG42710-RA 702 CG42710-RA 98..601 17..520 2520 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:29:57
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8781900..8782403 520..17 2520 100 Minus
Blast to na_te.dros performed on 2014-11-26 16:29:58 has no hits.

BO29077.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-24 14:35:30 Download gff for BO29077.complete
Subject Subject Range Query Range Percent Splice Strand
CG42710-RA 92..595 17..522 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:02:28 Download gff for BO29077.complete
Subject Subject Range Query Range Percent Splice Strand
CG42710-RA 98..601 17..522 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:20:36 Download gff for BO29077.complete
Subject Subject Range Query Range Percent Splice Strand
CG42710-RA 98..601 17..522 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:20:36 Download gff for BO29077.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8781898..8782403 17..522 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:02:28 Download gff for BO29077.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8781898..8782403 17..522 99   Minus

BO29077.pep Sequence

Translation from 16 to 538

> BO29077.pep
MEELVDLDEPYLYMIGIPTELRVHWAYIVDFLRPEENRQQINDPNVELVP
LSQRQYREETTDLEVVPLPQEPSIDLSGAGDGHHVIPRIGDNEMPTVIIF
LPRIMPLPWSSLKRLKPVIIAASNILFRKILSHFGIDLNQVFALGLSYNT
HLTIFHCFMEYLTSWITGASFLDH

BO29077.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:23:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG42710-PA 168 CG42710-PA 1..168 1..168 888 100 Plus