BO29101.complete Sequence
538 bp assembled on 2011-08-26
GenBank Submission: KX799806
> BO29101.complete
GAAGTTATCAGTCGACATGCTGCGAATCGTTGTAACTTTGGCTCTAATTC
TGGCCACAGTCAATGCCACCAATGTCCAGCAGTGCAAAAATAAGCCGTTT
CCACTGGATGTGAATATTAAGGATTGCGAGGAACCGCCGTGCGTTGTGTA
CAAAGGAACCATAGCAGTCATGGAGGTGCACTTCCTGGGCAATAACAACA
ATATCAAGAGCATTACGGCCACCACAACGGCAAAGGTTTTGGGCATGAAT
CTGCCATATGCCCTACCCGACGAAGTGTCCGATGTGTGCCGCAATCTCCT
GTACGGTGCCATCTGTCCCATCGACAAGGACGAGGATGTCACGTATCAGT
TCAACTTCTATGTGGAGCCTTCGTTCCCGGAAATAACGGCGGATGTCACT
GTCACGTTGAACGATGCGCAGAACGAACCGATCACCTGCTTCGTCGTGAG
CTGTAAAATCCGGAAGGGAGCCACTGCAGCACAGATGGACGGATATCTGT
TGGACTGGACGAACCCCCTTGCAAGCTTTCTAGACCAT
BO29101.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:12:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Npc2e-RB | 507 | CG31410-PB | 1..504 | 17..520 | 2520 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:12:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Npc2e-RB | 661 | CG31410-RB | 67..570 | 17..520 | 2520 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:12:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10053929..10054257 | 192..520 | 1645 | 100 | Plus |
| 3R | 32079331 | 3R | 10053763..10053874 | 84..195 | 545 | 99.1 | Plus |
| 3R | 32079331 | 3R | 10053398..10053465 | 17..84 | 340 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:12:03 has no hits.
BO29101.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-26 13:54:11 Download gff for
BO29101.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Npc2e-RB | 1..504 | 17..522 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:50:08 Download gff for
BO29101.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Npc2e-RB | 67..570 | 17..522 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:54:05 Download gff for
BO29101.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Npc2e-RB | 67..570 | 17..522 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:54:05 Download gff for
BO29101.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10053398..10053464 | 17..83 | 100 | -> | Plus |
| 3R | 10053763..10053870 | 84..191 | 100 | -> | Plus |
| 3R | 10053929..10054257 | 192..522 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:50:08 Download gff for
BO29101.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 5879120..5879186 | 17..83 | 100 | -> | Plus |
| arm_3R | 5879485..5879592 | 84..191 | 100 | -> | Plus |
| arm_3R | 5879651..5879979 | 192..522 | 99 | | Plus |
BO29101.pep Sequence
Translation from 16 to 538
> BO29101.pep
MLRIVVTLALILATVNATNVQQCKNKPFPLDVNIKDCEEPPCVVYKGTIA
VMEVHFLGNNNNIKSITATTTAKVLGMNLPYALPDEVSDVCRNLLYGAIC
PIDKDEDVTYQFNFYVEPSFPEITADVTVTLNDAQNEPITCFVVSCKIRK
GATAAQMDGYLLDWTNPLASFLDH
BO29101.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:58:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Npc2e-PB | 168 | CG31410-PB | 1..168 | 1..168 | 887 | 100 | Plus |
| Npc2d-PA | 173 | CG12813-PA | 7..173 | 4..166 | 272 | 38 | Plus |
| Npc2c-PA | 165 | CG3934-PA | 7..164 | 2..154 | 265 | 35.4 | Plus |
