Clone BO29102 Report

Search the DGRC for BO29102

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:291
Well:2
Vector:pDNR-Dual
Associated Gene/TranscriptCG18607-RA
Protein status:BO29102.pep: Imported from assembly
Sequenced Size:706

Clone Sequence Records

BO29102.complete Sequence

706 bp assembled on 2011-08-26

GenBank Submission: KX797470

> BO29102.complete
GAAGTTATCAGTCGACATGACTCCCACGACAATAGATGGCGTCACGATAC
GCATCATGCGCCCAGAGGATTATGCACAGGTAAAAGCCTATATGGAGGCT
GAGTACTACACATCGGAGCCTCTGTGCCAGTCCAGCGGCGAACCCGTTCA
CCAGCAGAACGAGGAGATCAACGACGCCTTCAACCAGTCGATAATCGCCG
AGGGCACCAGCCTTTTGGCACTGGATGAAAACGATGGTGGCCGGATTGTG
GGTCTAGTTCTGGCATGTGCCAGTTATCCCGATAATGTGAATGCAGGAAC
ATTGAATTTGAAGCTCGAGAATGTGGAGGATAACGCTTGGGGTCGAATGT
ATCATTTACTAATGAAGGCCAAGCGCGAAGTCAATCTGTTTGAGCGCTAC
GACATCCCGAAGGCGCTCTACTCCCACGTGACCAGCGTGGCCTCGTGGAA
GAGGGGCAAGGGCCTGGGCTCCCGCCTGGCCGCCACCCTGATGGAGCTGG
GCCGATCGAATGGTTTCCCCCTTATGATGGCCTTCTGCACTAGCTTCTAC
TCCGCTCGCCAGAAGGGGGCCTTGGGCATGGAGTGCATCTATTCCATCGA
CTACGCCGACTATAAGGACGATGAAGGACGAGTGATCTTCACACCGGCAG
CCCCACACACAAAGCTGCGAGTGATGGCAATCAAACTGGCAAGCTTTCTA
GACCAT

BO29102.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:12:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG18607-RA 675 CG18607-PA 1..672 17..688 3360 100 Plus
CG10659-RA 669 CG10659-PA 360..638 382..660 510 78.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:12:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG18607-RA 744 CG18607-RA 18..689 17..688 3360 100 Plus
CG10659-RA 837 CG10659-RA 390..668 382..660 510 78.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:12:20
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 19289126..19289797 17..688 3360 100 Plus
2L 23513712 2L 20025144..20025422 660..382 510 78.9 Minus
Blast to na_te.dros performed on 2014-11-26 22:12:21 has no hits.

BO29102.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-26 13:54:12 Download gff for BO29102.complete
Subject Subject Range Query Range Percent Splice Strand
CG18607-RA 1..672 17..690 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:50:17 Download gff for BO29102.complete
Subject Subject Range Query Range Percent Splice Strand
CG18607-RA 18..689 17..690 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:54:15 Download gff for BO29102.complete
Subject Subject Range Query Range Percent Splice Strand
CG18607-RA 18..689 17..690 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:54:15 Download gff for BO29102.complete
Subject Subject Range Query Range Percent Splice Strand
2R 19289126..19289797 17..690 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:50:17 Download gff for BO29102.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 15176631..15177302 17..690 99   Plus

BO29102.pep Sequence

Translation from 16 to 706

> BO29102.pep
MTPTTIDGVTIRIMRPEDYAQVKAYMEAEYYTSEPLCQSSGEPVHQQNEE
INDAFNQSIIAEGTSLLALDENDGGRIVGLVLACASYPDNVNAGTLNLKL
ENVEDNAWGRMYHLLMKAKREVNLFERYDIPKALYSHVTSVASWKRGKGL
GSRLAATLMELGRSNGFPLMMAFCTSFYSARQKGALGMECIYSIDYADYK
DDEGRVIFTPAAPHTKLRVMAIKLASFLDH

BO29102.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:58:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG18607-PA 224 CG18607-PA 1..224 1..224 1166 100 Plus
CG10659-PA 222 CG10659-PA 1..222 1..224 673 57.6 Plus
CG10476-PA 222 CG10476-PA 7..222 7..224 415 39.9 Plus
CG18606-PB 222 CG18606-PB 7..222 7..224 408 39.4 Plus
AANATL2-PB 216 CG9486-PB 1..216 6..224 312 33.2 Plus