BO29110.complete Sequence
1036 bp assembled on 2011-09-14
GenBank Submission: KX795589
> BO29110.complete
GAAGTTATCAGTCGACATGATGCAGCCATGGGCCGTTGTGGTCCTACTTC
TGCCCCTGATCAACGGAGATGTGAGTCACCTGCCCAGGGAATATATACCG
CCCAGTGCGGAACTGGAGCCAACCACACGGTCTGCTGCTGATGGCCAGGA
GGTGCAGAAGGATCCATCTGGATTCTATCCATCGACTGGACTGCCACTGC
CGCCGGGCTATGCCATTCCCACGGGCAGCAACGTTTTGCCACAGCCTGTC
CAGCCGCCAAACTTCCCTCTGCCCATCTATCCACCATTCTACGGCTTCGG
CGGAGGTCCTGTCGAGCAGGGAGGAGGACATGGTATTGGGCCAGTGCCTT
CGGCCTATCCCAACGGAGGTGCATTCCCGGCGGGTCCTACCAATGGAGGC
GCATTCGCAGGGGGTCCTACGAATGCGGCCTTCCAACTGCCACCAGGTGG
TCCTTTCGGTCCGCAAGCTGGTAATTTTGCCCAGCCAGGTGGTTTCCCGC
AGGCAGGTGGGTTTCCCCCACAAGGAGCTGGCTTCCAGCCACAAGGCATC
CCTGGCAATGGATTCCCAACGCAAGGAGCTCCCTTCTCACCACAGCAGGG
AGTGTTCCCATCACAAGGAGGTGCCTTCGGGCCACAGGGAATACCGGGCA
ATGGTTTCCTAGGAGGTAACTTCCCGCCACAGGGAGGGCCCTTCCCAGGA
TCCGCATATCCACCGGAGTTCTTGACAAACCAGGGACTTCCCCTCACAAA
TCCCCAGGGTCCCTTCCAAGGACCCAGTCCAGCAGGATTCAATGTGCCCG
CAGGATTCGGCGGACCTGTGCCCGGCCAGAATCCCTACCAACAATTTGGA
CCCGGTTTCGGAGGACCCGCTCCGCCGGGCTACTCCGATGAGCCGGCGAA
GGAGCAACCAAAGGACAGTGAGAGGACAGTAGTGGCACCACCATCGGCCG
ACGATCCCAAGAGTGTGGCGGATACGGTTTACGCATCCAATGGCGGCTAT
GTCTACAAGAGGGCCAAGGCAAGCTTTCTAGACCAT
BO29110.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:23:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11581-RB | 1005 | CG11581-PB | 1..1002 | 17..1018 | 5010 | 100 | Plus |
| CG11581-RA | 1005 | CG11581-PA | 1..1002 | 17..1018 | 5010 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:23:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11581-RB | 1534 | CG11581-RB | 20..1026 | 12..1018 | 5020 | 99.9 | Plus |
| CG11581-RA | 1096 | CG11581-RA | 20..1026 | 12..1018 | 5020 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:23:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 14176942..14177948 | 12..1018 | 5020 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 07:23:19 has no hits.
BO29110.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-14 12:00:04 Download gff for
BO29110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11581-RA | 1..1002 | 17..1020 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:13:46 Download gff for
BO29110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11581-RA | 25..1026 | 17..1020 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:09:38 Download gff for
BO29110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11581-RA | 25..1026 | 17..1020 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:09:38 Download gff for
BO29110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 14176947..14177948 | 17..1020 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:13:46 Download gff for
BO29110.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 14070980..14071981 | 17..1020 | 99 | | Plus |
BO29110.pep Sequence
Translation from 16 to 1036
> BO29110.pep
MMQPWAVVVLLLPLINGDVSHLPREYIPPSAELEPTTRSAADGQEVQKDP
SGFYPSTGLPLPPGYAIPTGSNVLPQPVQPPNFPLPIYPPFYGFGGGPVE
QGGGHGIGPVPSAYPNGGAFPAGPTNGGAFAGGPTNAAFQLPPGGPFGPQ
AGNFAQPGGFPQAGGFPPQGAGFQPQGIPGNGFPTQGAPFSPQQGVFPSQ
GGAFGPQGIPGNGFLGGNFPPQGGPFPGSAYPPEFLTNQGLPLTNPQGPF
QGPSPAGFNVPAGFGGPVPGQNPYQQFGPGFGGPAPPGYSDEPAKEQPKD
SERTVVAPPSADDPKSVADTVYASNGGYVYKRAKASFLDH
BO29110.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:15:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11581-PB | 334 | CG11581-PB | 1..334 | 1..334 | 1868 | 100 | Plus |
| CG11581-PA | 334 | CG11581-PA | 1..334 | 1..334 | 1868 | 100 | Plus |
| CG15635-PB | 1136 | CG15635-PB | 408..717 | 21..293 | 209 | 30.6 | Plus |
| CG15635-PB | 1136 | CG15635-PB | 583..900 | 19..329 | 209 | 28.3 | Plus |
| CG15635-PB | 1136 | CG15635-PB | 288..604 | 19..328 | 200 | 29 | Plus |
| ZAP3-PF | 1258 | CG32685-PF | 1022..1223 | 89..303 | 196 | 31.1 | Plus |
| ZAP3-PD | 1293 | CG32685-PD | 1022..1223 | 89..303 | 196 | 31.1 | Plus |
| CG15635-PB | 1136 | CG15635-PB | 728..1064 | 13..314 | 184 | 28.4 | Plus |
| CG15635-PB | 1136 | CG15635-PB | 819..1092 | 19..273 | 174 | 32.2 | Plus |
