BO29118.complete Sequence
862 bp assembled on 2011-08-26
GenBank Submission: KX798984
> BO29118.complete
GAAGTTATCAGTCGACATGTTGTTCCGTTCGCAAACCCATGTTTTTCCAG
GTGTGTACATGATGGTGGCGATGCTCGTGGTCGCCTTGAGTGGCTACCAG
GTGCAGTCCTATAGCGCCAAGGATATTCTTGCCGATGTCTTGATGACGGA
TCTGCTGAATCGCATGGACAAAGACATGCAGGTGGGCTATTACGACGTGG
GCAACGAGGCAGCCGCTGGCTCCAAGGACAACGTGGACCTGGTCTCCCGG
TCGGAGTACGCGAGGCTGTGTGACGGCGGAAGCGACTGCATCCTGCAATC
GGGCTCGGCATCGGGAGCTGCCTCCCATCCTTCGCTGCGGGATGACGAGT
TTCTGCAGCACAGTTCGCTGTGGGGTCACCAGTTCATCTCCGGCGGAATG
GGAGAGGGTCCCAACAGGTATCCCACTATAGTGAAGAACGACGCCGGCCT
GCCTGCCTACTGCAACCCTCCTAATCCCTGCCCTGAGGGCTACGACATGG
AGACGCAAGGCGGCAGCTGCATTGTCGACTTCGAAAACACGGCCATCTTC
AGCCGGGAGTTCCAGGCCGCTCAGGACTGTACCTGCGACAACGAGCATAT
GTTCGACTGCTCGGAACAGGATAGTGCTGATGTGGGCGGCGACAAGGGTG
ACCTGAACTCCGCCGTGGAGCAGTACATCATGCAGATGGGCCAGGAGAAC
AGCCTGAACAACGTTAACAGCCTGGCTAAGAAGGCCGGATATCCTGTGAT
GCCCGATCCTCGGCTGGACGACGCGGTCATAAACCCGTTCCTCCAGGGCG
ACCGCTTGCCCATAGCCGCCAAGAAGGGCAACCTTTTATTCCACGCAAGC
TTTCTAGACCAT
BO29118.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:26:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 7B2-RB | 831 | CG1168-PB | 1..828 | 17..844 | 4140 | 100 | Plus |
| 7B2-RA | 816 | CG1168-PA | 20..813 | 51..844 | 3970 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:26:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 7B2-RB | 1148 | CG1168-RB | 153..980 | 17..844 | 4140 | 100 | Plus |
| 7B2-RA | 1133 | CG1168-RA | 172..965 | 51..844 | 3970 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:26:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 5376999..5377807 | 36..844 | 4045 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:26:44 has no hits.
BO29118.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-26 13:54:36 Download gff for
BO29118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 7B2-RB | 184..1006 | 22..846 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:58:19 Download gff for
BO29118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 7B2-RB | 184..1006 | 22..846 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:01:18 Download gff for
BO29118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 7B2-RB | 158..980 | 22..846 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:01:18 Download gff for
BO29118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 5376999..5377807 | 36..846 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:58:19 Download gff for
BO29118.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 1202721..1203529 | 36..846 | 99 | | Plus |
BO29118.pep Sequence
Translation from 16 to 862
> BO29118.pep
MLFRSQTHVFPGVYMMVAMLVVALSGYQVQSYSAKDILADVLMTDLLNRM
DKDMQVGYYDVGNEAAAGSKDNVDLVSRSEYARLCDGGSDCILQSGSASG
AASHPSLRDDEFLQHSSLWGHQFISGGMGEGPNRYPTIVKNDAGLPAYCN
PPNPCPEGYDMETQGGSCIVDFENTAIFSREFQAAQDCTCDNEHMFDCSE
QDSADVGGDKGDLNSAVEQYIMQMGQENSLNNVNSLAKKAGYPVMPDPRL
DDAVINPFLQGDRLPIAAKKGNLLFHASFLDH
BO29118.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:58:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 7B2-PB | 276 | CG1168-PB | 1..276 | 1..276 | 1468 | 100 | Plus |
| 7B2-PA | 271 | CG1168-PA | 1..271 | 1..276 | 1417 | 97.8 | Plus |
