BO29120.complete Sequence
2134 bp assembled on 2011-10-14
GenBank Submission: KX797860
> BO29120.complete
GAAGTTATCAGTCGACATGACGATGAAATTGTTCTGCATTTGGATTGCTA
GTCACGTTCTCAGTGTTCTGGTTTTAGCGGCCCCCACAAGCGAGGATGTA
CTCAACCAGGACACGCCTTACATGAAGGAACTAATGCGTCAAGCCAAAGC
TGCTGAGATCGAGAGCTTTATGAACCAGAAGGTGGATCCGTGCAAGGATT
TCTACGCATTCTCCTGTGGCAACTATAAACGCATCAACTCGGCTTTGAAC
ATGCGGGTATTGACTACTGGAGTGTTCGAGACTTTGACAAAAGGGCTCAA
CCGAAAGATCCTGAAGATGCTCAACACACCCCATGATAGCCACGACACTC
CGGAGGACATTCAGGTGAAGCACTTCTACGAGTCCTGTCTCCAGATCAAG
GAGCTCAACTCGACGTACAGCGAAAAGCTGAAGCGGCTCATTGCAGAATT
TGGAACGATGCCGCTGCTGGAAGGATCCTCCTGGCAGGAGGACGACTTTG
ACTGGCTGAATACTACTGCTCGCATGGCCCACCGATACGGAATAATGTCC
ATTATAGGCGTTGGAGTCGCCACGGACTTCGCCAATAACCAAAAAAACAT
TATTTACATAAACCAGCAGGAGTTCCCATTAAAGACACGTTCCATGTATA
TGGATAACGAAACGGCCATCTACCGCCAAAATTATCAGAATAATATCCAG
CTCATTTTGGAGAAATACTTAGGTGTTAAGGACGAATTGGCAAGAAAAGC
GGCCAAGGAAATGTTTGAATTCGAGGTGGACTTGGCCCATGGACTGGTGG
ACAACAACAAACACCTGAACCTAAGGGACCTGATCGAACTTCTGACTGTC
GCTGAATTGCGCGAGAGATATGCCCCCACCTTGGACACCGACCAATTGAT
ATTCGTGAGCATGGGAGAGAAGATTTCCGACAAGGTCTACGAATACAACA
GACGTTATCAGCAAAATTTGGTCGAGGTGATCGAGCGTACGCCCAAGAGC
ACTGTGGCCAACTATTTATTCCTTCGCCTGATCTGGGAGTTTATACAGAA
ACCAAGTGGAGTGGCGGAAAAGCCGACAGAGGCCTGTGTGGACTTCACCA
AGACGTACTTCGCGAAGAATCTGGACAACATGATCTACCGCCGCTACAAA
AACGAGAAATCCTCCAGAGAAATCGACAGCATGTGGCATCAATTGAAGTC
CACCTTTAAGGAGACCTTGCTATCCAGTCCGGCTCTAGATTGGATCGAGC
CATCCACTCGAAGTCTTGCCATCGCTAAGCTGGAGGCTATGACCCTGGAG
GTCAACAACTACGTTAAGGAGAACTTTACCGAGGAATTTGCGGACCTCAA
TTTGCAAAACACGGACTGCGTAGAGAATTTGCGACAGGTTCAGATGCTGC
AAGCAAAGCAAATGCGGCAATTGTATCACCAACCGGCTAAGCCACTGGAA
GCGGGCGAACTTTTGAGCTATACCCCAAGCAACATCCTGCTGGAGAACAG
CATTAAGGTTCCGGTGGCCCTGCTACAACCCTTCTACATTTGGTCCGATG
TCTACCCCAATGCGGTTATGTTCGGAACCCTGGCCTACCTAATTGGACAC
GAGTTAATCCACGGATTCGACGACAGCGGACGGAAGTTTGACGAGAAGGG
GAACTCAAAGGATTGGTGGGATGAGAAGTCCAGCAGCAACTTCCTAAAAC
GACGGGATTGCTTCACCAAGCAGTATGGCAGGTATGTCTACGATGGCATT
CAGTTGAAGGAGTCAACCGCGCAGTCGGAGAACATTGCGGACAACGGCGG
AATGCGACTGGCCTACACCGCCTACCGGAAATGGTACGAAAACCAGTTGA
CACTTCCTAATGGGGCTCAGGATATGACCAAGGAGACCCTGCCCAACCTG
CGATACACCGCCAAACAACTATTCTTCATTAGCTTTGCTCAGAGCTGGTG
CAACGATGTACATCCCAAGGTGAAGGCCCTTCAGGTGTCAACCGACGACC
ACATGCCAGGAAAGTTCCGCGTTATTGGAACTTTATCTAACTTTGAGGAG
TTTTCAAAGGAGTTCAACTGTCACGCCGGATCCGCCATGAATCCCATCGA
AAAATGCATACTTTACGCAAGCTTTCTAGACCAT
BO29120.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:56:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14527-RA | 2103 | CG14527-PA | 1..2100 | 17..2116 | 10500 | 100 | Plus |
| CG14526-RC | 2124 | CG14526-PC | 34..2121 | 29..2116 | 5145 | 83.1 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:56:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14527-RA | 2154 | CG14527-RA | 10..2111 | 15..2116 | 10510 | 100 | Plus |
| CG14526-RC | 2323 | CG14526-RC | 34..2121 | 29..2116 | 5145 | 83.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:56:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 28880801..28882902 | 15..2116 | 10510 | 100 | Plus |
| 3R | 32079331 | 3R | 28883726..28885813 | 29..2116 | 5145 | 83.1 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:56:08 has no hits.
BO29120.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-10-14 10:57:36 Download gff for
BO29120.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14527-RA | 1..2100 | 17..2118 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:41:17 Download gff for
BO29120.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14527-RA | 12..2111 | 17..2118 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:46:15 Download gff for
BO29120.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14527-RA | 12..2111 | 17..2118 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:46:15 Download gff for
BO29120.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 28880803..28882902 | 17..2118 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:41:17 Download gff for
BO29120.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 24706525..24708624 | 17..2118 | 99 | | Plus |
BO29120.pep Sequence
Translation from 16 to 2134
> BO29120.pep
MTMKLFCIWIASHVLSVLVLAAPTSEDVLNQDTPYMKELMRQAKAAEIES
FMNQKVDPCKDFYAFSCGNYKRINSALNMRVLTTGVFETLTKGLNRKILK
MLNTPHDSHDTPEDIQVKHFYESCLQIKELNSTYSEKLKRLIAEFGTMPL
LEGSSWQEDDFDWLNTTARMAHRYGIMSIIGVGVATDFANNQKNIIYINQ
QEFPLKTRSMYMDNETAIYRQNYQNNIQLILEKYLGVKDELARKAAKEMF
EFEVDLAHGLVDNNKHLNLRDLIELLTVAELRERYAPTLDTDQLIFVSMG
EKISDKVYEYNRRYQQNLVEVIERTPKSTVANYLFLRLIWEFIQKPSGVA
EKPTEACVDFTKTYFAKNLDNMIYRRYKNEKSSREIDSMWHQLKSTFKET
LLSSPALDWIEPSTRSLAIAKLEAMTLEVNNYVKENFTEEFADLNLQNTD
CVENLRQVQMLQAKQMRQLYHQPAKPLEAGELLSYTPSNILLENSIKVPV
ALLQPFYIWSDVYPNAVMFGTLAYLIGHELIHGFDDSGRKFDEKGNSKDW
WDEKSSSNFLKRRDCFTKQYGRYVYDGIQLKESTAQSENIADNGGMRLAY
TAYRKWYENQLTLPNGAQDMTKETLPNLRYTAKQLFFISFAQSWCNDVHP
KVKALQVSTDDHMPGKFRVIGTLSNFEEFSKEFNCHAGSAMNPIEKCILY
ASFLDH
BO29120.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:33:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14527-PA | 700 | CG14527-PA | 1..700 | 1..700 | 3673 | 100 | Plus |
| CG14526-PC | 707 | CG14526-PC | 11..707 | 4..700 | 3016 | 80.6 | Plus |
| CG14528-PA | 682 | CG14528-PA | 7..682 | 8..700 | 1183 | 35.9 | Plus |
| CG14529-PA | 681 | CG14529-PA | 32..681 | 33..700 | 969 | 31.5 | Plus |
| CG14523-PA | 671 | CG14523-PA | 47..671 | 30..705 | 879 | 31.4 | Plus |
