BO29135.complete Sequence
1393 bp assembled on 2011-08-26
GenBank Submission: KX797610
> BO29135.complete
GAAGTTATCAGTCGACATGCAGAGACTGCAATTCGCTCTGCTAGCGTCGC
TGCTCCTGCTGGTGCTGCTTCTTCCGGGGATTAGGAGCACTCCCATCGAC
CAGGACGTCGACATTGTTCACTATCAGCCGGAGCAAGTGCATCTGTCCTT
TGGAGAAACCGTGCTCGACATTGTCGTCACCTGGAACACGCGCGACAACA
CCAACGAATCAATCTGTGAGTTCGGCATCGATGGACTGCATCAGCGAGTG
AAGGCGACGCAAATGCCCACGAAATTCGTGGATGGTGGAGCCAAAAAGGC
CACCCAGTATATACATCGTGTGACGCTGTCCCACCTGAAACCGAATAGCA
CCTATCTCTACCACTGTGGCAGTGAGTTGGGCTGGTCCGCCACCTATTGG
TTTCGGACGCGATTCGATCACGCCGACTGGTCGCCCTCGTTGGCGATCTA
CGGCGATATGGGCGTGGTGAATGCGGCATCCCTTCCAGCGCTGCAGCGTG
AAACGCAGAGCGGCCAGTACGACGCCATCATCCATGTGGGAGACTTCGCC
TACGACATGGACTGGGAAAACGGAGAGGTCGGCGACGAGTTTATGCGCCA
GGTGGAGACCATAGCCGCCTACTTACCATATATGGTGTGCGTGGGCAACC
ACGAGGAGAAGTACAACTTTTCGCACTACATCAATCGGTTCAGCATGCCG
GGTGGATCGGATAACATGTTCTATAGCTTCGATCTTGGACCGGTGCACTT
CATCGGTTTTAGCACAGAAGTCTATTATTTCACTAAGTTCGGGATCAAGC
AGATCGTGATGCAGTACGACTGGCTGGAGCGGGATTTGATCGAGGCCAAC
AAGCCAGAAAACCGGAAGAAGCGTCCCTGGATTATCACATACGGCCATCG
GCCCATGTACTGCAGCAATGACAACGGAGATGACTGTGCCAATCATGAGA
CAATCGTTCGAAAGGGTCTGCCCATGCTGGATTTCTTCGGGCTGGAGCCA
CTCTTTTATCAGTACGGCGTAGATATTGAATTGTGGGCACACGAGCACTG
CTACGAGCGGATGTGGCCCATGTACAACTACACCGTGTTCAATGGATCGC
TGGCCGAGCCGTATGTGAATCCCGGTGCACCAATACACATCATTTCGGGA
GCTGCCGGCAATCACGAGGGCAGGGAGCCATTCTTCAAGCGCATGCCTCC
GTGGAGTGCCTTCCACAGCCAGGACTTTGGGTATCTTCGACTGAAGGCCC
ACAACGGCACCCATCTACATTTCGAGCAGGTGTCCGATGACAAGAAGGGC
GAGGTCATCGATAGTTTCTGGGTGGTCAAGGACAAGCATGGACCGTACCA
GTCTGATCTCAACTCAAAAACTTTGGCAAGCTTTCTAGACCAT
BO29135.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:28:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1637-RE | 1362 | CG1637-PE | 1..1359 | 17..1375 | 6795 | 100 | Plus |
| CG1637-RA | 1362 | CG1637-PA | 1..1359 | 17..1375 | 6795 | 100 | Plus |
| CG1637-RB | 1377 | CG1637-PB | 1..141 | 17..157 | 705 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:28:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1637-RE | 1868 | CG1637-RE | 341..1699 | 17..1375 | 6795 | 100 | Plus |
| CG1637-RA | 1773 | CG1637-RA | 246..1604 | 17..1375 | 6795 | 100 | Plus |
| CG1637-RB | 2196 | CG1637-RB | 246..386 | 17..157 | 705 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:28:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10872344..10873055 | 1375..664 | 3560 | 100 | Minus |
| X | 23542271 | X | 10873136..10873479 | 663..320 | 1720 | 100 | Minus |
| X | 23542271 | X | 10873541..10873710 | 323..154 | 850 | 100 | Minus |
| X | 23542271 | X | 10877415..10877553 | 155..17 | 695 | 100 | Minus |
| X | 23542271 | X | 10875242..10875479 | 662..425 | 320 | 75.6 | Minus |
| X | 23542271 | X | 10874489..10875145 | 1342..689 | 310 | 70.2 | Minus |
| X | 23542271 | X | 10870726..10870825 | 1341..1242 | 230 | 82 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:28:42 has no hits.
BO29135.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-26 13:54:38 Download gff for
BO29135.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1637-RA | 255..1613 | 17..1377 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:59:28 Download gff for
BO29135.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1637-RA | 246..1604 | 17..1377 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:02:17 Download gff for
BO29135.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG1637-RA | 246..1604 | 17..1377 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:02:17 Download gff for
BO29135.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10877415..10877553 | 17..155 | 100 | | Minus |
| X | 10872341..10873055 | 664..1377 | 99 | <- | Minus |
| X | 10873136..10873479 | 320..663 | 100 | <- | Minus |
| X | 10873545..10873708 | 156..319 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:59:28 Download gff for
BO29135.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 10771448..10771586 | 17..155 | 100 | | Minus |
| arm_X | 10766374..10767088 | 664..1377 | 99 | <- | Minus |
| arm_X | 10767169..10767512 | 320..663 | 100 | <- | Minus |
| arm_X | 10767578..10767741 | 156..319 | 100 | <- | Minus |
BO29135.pep Sequence
Translation from 16 to 1393
> BO29135.pep
MQRLQFALLASLLLLVLLLPGIRSTPIDQDVDIVHYQPEQVHLSFGETVL
DIVVTWNTRDNTNESICEFGIDGLHQRVKATQMPTKFVDGGAKKATQYIH
RVTLSHLKPNSTYLYHCGSELGWSATYWFRTRFDHADWSPSLAIYGDMGV
VNAASLPALQRETQSGQYDAIIHVGDFAYDMDWENGEVGDEFMRQVETIA
AYLPYMVCVGNHEEKYNFSHYINRFSMPGGSDNMFYSFDLGPVHFIGFST
EVYYFTKFGIKQIVMQYDWLERDLIEANKPENRKKRPWIITYGHRPMYCS
NDNGDDCANHETIVRKGLPMLDFFGLEPLFYQYGVDIELWAHEHCYERMW
PMYNYTVFNGSLAEPYVNPGAPIHIISGAAGNHEGREPFFKRMPPWSAFH
SQDFGYLRLKAHNGTHLHFEQVSDDKKGEVIDSFWVVKDKHGPYQSDLNS
KTLASFLDH
BO29135.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:58:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG1637-PE | 453 | CG1637-PE | 1..453 | 1..453 | 2493 | 100 | Plus |
| CG1637-PA | 453 | CG1637-PA | 1..453 | 1..453 | 2493 | 100 | Plus |
| CG1637-PB | 458 | CG1637-PB | 1..458 | 1..446 | 1659 | 67.2 | Plus |
| CG1637-PD | 459 | CG1637-PD | 1..459 | 1..446 | 1653 | 66.9 | Plus |
| CG1637-PC | 450 | CG1637-PC | 1..448 | 1..446 | 1604 | 65.4 | Plus |
