BO29137.complete Sequence
676 bp assembled on 2011-08-26
> BO29137.complete
GAAGTTATCAGTCGACATGGCTGATGATGAGGCTAAGAAGGCTAAACAGG
CTGAGATCGAGCGCAAGCGTGCTGAGGTGCGCAAGCGCATGGAGGAAGCC
TCCAAGGCCAAGAAGGCCAAGAAGGGTTTCATGACCCCAGAGAGGAAGAA
GAAACTCAGGTTGCTGCTGCGTAAGAAAGCCGCTGAGGAGCTGAAGAAAG
AACAGGAACGCAAAGCGGCTGAACGTAGACGCATCATCGAAGAACGTTGC
GGCAGTCCCAGGAATCTCAGCGATGCCAGCGAAGGCGAATTGCAAGAGAT
TTGCGAAGAGTATTACGAGCGTATGTATATTTGTGAAGGCCAGAAATGGG
ATCTGGAATACGAAGTCAGGAAAAAAGACTGGGAGATCAACGATCTCAAT
GCCCAAGTTAACGATCTTCGCGGCAAGTTCGTCAAGCCAGCCCTGAAGAA
GGTCTCCAAATACGAAAACAAATTCGCCAAGCTGCAGAAGAAGGCCGCTG
AGTTCAACTTCCGCAACCAGCTCAAGGTGGTGAAGAAGAAGGAGTTCACG
CTGGAGGAGGAGGAGAAGGAGAAGAAACCCGACTGGTCCAAGGGCAAGCC
CGGAGATGCCAAGGTGAAGGAGGAGGTTGAGGCCGAAGCTGCAAGCTTTC
TAGACCATTCGTTTGGCTTTAAGGGG
BO29137.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:31:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
wupA-RF | 627 | CG7178-PF | 1..624 | 17..640 | 3120 | 100 | Plus |
wupA-RC | 627 | CG7178-PC | 1..624 | 17..640 | 3120 | 100 | Plus |
wupA-RG | 810 | CG7178-PG | 196..807 | 29..640 | 3060 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:31:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
wupA-RF | 1129 | CG7178-RF | 110..733 | 17..640 | 3120 | 100 | Plus |
wupA-RC | 1160 | CG7178-RC | 141..764 | 17..640 | 3120 | 100 | Plus |
wupA-RG | 1343 | CG7178-RG | 336..947 | 29..640 | 3060 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:31:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 18106681..18106822 | 571..430 | 710 | 100 | Minus |
X | 23542271 | X | 18113447..18113577 | 160..30 | 655 | 100 | Minus |
X | 23542271 | X | 18113257..18113382 | 285..160 | 630 | 100 | Minus |
X | 23542271 | X | 18109470..18109572 | 385..283 | 515 | 100 | Minus |
X | 23542271 | X | 18105964..18106034 | 640..570 | 355 | 100 | Minus |
X | 23542271 | X | 18106888..18106933 | 429..384 | 230 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:31:03 has no hits.
BO29137.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-26 13:54:41 Download gff for
BO29137.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wupA-RF | 104..735 | 17..650 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:00:40 Download gff for
BO29137.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wupA-RC | 141..772 | 17..650 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:03:17 Download gff for
BO29137.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
wupA-RC | 141..772 | 17..650 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:03:17 Download gff for
BO29137.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 18106681..18106822 | 430..571 | 100 | <- | Minus |
X | 18106888..18106931 | 386..429 | 100 | <- | Minus |
X | 18109470..18109570 | 285..385 | 100 | <- | Minus |
X | 18113258..18113381 | 161..284 | 100 | <- | Minus |
X | 18113447..18113575 | 32..160 | 100 | <- | Minus |
X | 18105956..18106032 | 572..650 | 94 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:00:40 Download gff for
BO29137.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 18000714..18000855 | 430..571 | 100 | <- | Minus |
arm_X | 18000921..18000964 | 386..429 | 100 | <- | Minus |
arm_X | 18003503..18003603 | 285..385 | 100 | <- | Minus |
arm_X | 18007291..18007414 | 161..284 | 100 | <- | Minus |
arm_X | 18007480..18007608 | 32..160 | 100 | <- | Minus |
arm_X | 17999989..18000065 | 572..650 | 94 | <- | Minus |
BO29137.pep Sequence
Translation from 16 to 676
> BO29137.pep
MADDEAKKAKQAEIERKRAEVRKRMEEASKAKKAKKGFMTPERKKKLRLL
LRKKAAEELKKEQERKAAERRRIIEERCGSPRNLSDASEGELQEICEEYY
ERMYICEGQKWDLEYEVRKKDWEINDLNAQVNDLRGKFVKPALKKVSKYE
NKFAKLQKKAAEFNFRNQLKVVKKKEFTLEEEEKEKKPDWSKGKPGDAKV
KEEVEAEAASFLDHSFGFKG
BO29137.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:59:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
wupA-PF | 208 | CG7178-PF | 1..208 | 1..208 | 1063 | 100 | Plus |
wupA-PC | 208 | CG7178-PC | 1..208 | 1..208 | 1063 | 100 | Plus |
wupA-PG | 269 | CG7178-PG | 65..269 | 4..208 | 1044 | 99.5 | Plus |
wupA-PE | 208 | CG7178-PE | 1..208 | 1..208 | 952 | 91.3 | Plus |
wupA-PD | 208 | CG7178-PD | 1..208 | 1..208 | 952 | 91.3 | Plus |