Clone BO29145 Report

Search the DGRC for BO29145

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:291
Well:45
Vector:pDNR-Dual
Associated Gene/Transcriptalpha-Adaptin-RB
Protein status:BO29145.pep: Imported from assembly
Sequenced Size:2890

Clone Sequence Records

BO29145.complete Sequence

2890 bp assembled on 2011-10-14

GenBank Submission: KX798300

> BO29145.complete
GAAGTTATCAGTCGACATGGAGAGAGCTGAAGGGTGTGAAGTCGTCTCTC
CGATCGATCAATCGCGGGGTGGAAAGGAAAGCGAAGCTTCCGCAGACGAA
TCACTGTTGTTTTACTGCAAAAGCAAAGAGGCCGAAGTCAAACGCATAAA
CAAGGAGTTGGCCAATATACGAAGCAAATTTAAAGGAGACAAAACCCTCG
ACGGCTATCAGAAAAAGAAATATGTCTGTAAGCTATTATTCATATTTCTC
CTCGGCCATGACATCGACTTCGGGCACATGGAGGCGGTCAATTTGCTGTC
CTCCAACAAATACTCAGAAAAGCAGATTGGTTACCTTTTCATCTCAGTGT
TGGTGAACACCAACAGCGACCTTATTCGGCTGATCATCCAATCTATAAAG
AATGATTTGCAGTCGCGTAATCCTGTGCACGTTAATCTGGCACTACAATG
CATTGCCAACATTGGAAGTCGGGATATGGCCGAGTCCTTTTCCAACGAAA
TACCCAAGCTACTCGTCTCGGGCGACACCATGGACGTGGTGAAGCAGTCG
GCGGCGCTATGCCTGCTCCGCCTGTTCCGCTCCTCGCCGGACATCATTCC
CGGTGGTGAGTGGACTTCGCGCATTATCCATTTGCTCAATGATCAGCACA
TGGGAGTGGTCACAGCGGCCACCTCGCTGATCGACGCCTTGGTGAAGCGC
AATCCGGACGAGTACAAGGGTTGTGTTAATTTGGCTGTTTCACGCTTATC
CCGGATCGTAACAGCCAGCTACACGGATCTTCAGGATTACACATATTACT
TTGTGCCGGCTCCATGGCTATCGGTGAAACTTCTGCGATTGCTGCAAAAC
TACAATCCAGTGACCGAAGAGGCCGGTGTGCGGGCCCGCTTGAATGAAAC
TTTGGAGACGATTTTGAACAAGGCGCAAGAGCCGCCAAAGAGTAAGAAGG
TGCAGCACTCTAACGCAAAGAACGCCGTGCTCTTCGAGGCCATCAACCTG
ATCATTCACAGCGACAGCGAGCCGAACCTTCTTGTCCGCGCTTGCAACCA
GTTGGGACAGTTCCTTAGCAATCGGGAGACCAACTTGCGCTATCTGGCTC
TGGAGTCCATGTGCCACCTGGCCACATCGGAGTTCTCGCACGAGGAGGTG
AAGAAGCACCAGGAGGTGGTCATTTTGTCAATGAAAATGGAGAAGGACGT
GTCCGTGCGCCAAATGGCGGTGGATCTTTTGTATGCCATGTGTGATCGTG
GTAATGCCGAGGAAATTGTTCAGGAGATGCTCAACTATCTGGAGACGGCC
GACTACTCTATTCGTGAGGAAATGGTGCTCAAGGTGGCCATTCTTGCCGA
GAAGTACGCCACGGATTATACCTGGTATGTGGACGTTATCCTCAATCTAA
TTCGCATTGCTGGCGACTACGTGTCTGAGGAAGTATGGTACCGCGTCATT
CAGATCGTGATCAATCGCGAGGAGGTTCAAGGCTATGCCGCAAAGACTGT
TTTTGAGGCGCTACAGGCCCCTGCCTGCCACGAAAACATGGTTAAAGTGG
GCGGCTACATCTTGGGCGAGTTTGGCAACTTAATCGCCGGAGATTCCCGC
TCAGCACCACTGGTACAATTCAAGCTACTGCACTCCAAGTACCACTTGTG
CTCGCCGATGACCCGGGCCCTTCTTCTGTCCACGTACATTAAATTTATCA
ACCTCTTTCCGGAAATTCGTACCAATATCCAGGATGTGTTCCGCCAGCAC
AGCAATCTTCGATCCGCAGATGCGGAACTGCAGCAGCGAGCTAGCGAATA
TCTCCAGCTTAGCATAGTGGCATCGACAGACGTTTTGGCCACCGTCCTGG
AGGAGATGCCATCGTTCCCGGAACGCGAGAGCTCAATTTTAGCAGTGCTA
AAGAAGAAGAAGCCCGGCAGGGTGCCGGAGAACGAAATTCGCGAGTCGAA
GAGCCCGGCACCCCTGACTTCTGCAGCGCAGAACAACGCCCTTGTGAACA
ATTCACATAGCAAGCTGAATAACAGCAACGCAAATACGGATCTGCTTGGA
TTAAGCACTCCGCCATCAAATAATATTGGCAGTGGTAGCAATAGCAACAG
TACGCTCATTGATGTTTTGGGCGACATGTACGGCAGCAATAGTAACAACA
ACTCAAGTGCCGTGTACAACACGAAGAAGTTTTTGTTCAAGAACAATGGT
GTTTTGTTTGAGAACGAAATGCTGCAGATCGGTGTGAAGAGCGAGTTTCG
CCAGAATTTAGGACGATTAGGCCTTTTCTACGGCAACAAGACACAGGTTC
CCCTGACAAACTTCAATCCTGTGCTGCAATGGTCTGCCGAGGATGCGCTT
AAGCTGAACGTGCAGATGAAGGTGGTGGAGCCAACCCTGGAGGCCGGCGC
CCAGATCCAACAACTGTTAACCGCGGAATGCATCGAGGACTACGCCGATG
CGCCAACAATCGAGATCAGTTTCCGCTACAACGGCACCCAGCAGAAGTTC
AGCATTAAACTGCCATTGAGCGTTAACAAATTCTTTGAGCCTACCGAAAT
GAATGCGGAATCATTCTTTGCACGATGGAAGAACCTTAGCGGTGAACAAC
AACGGTCACAGAAAGTGTTCAAGGCTGCACAGCCACTGGATTTGCCCGGA
GCCCGCAACAAGCTTATGGGCTTTGGAATGCAACTGCTGGACCAAGTGGA
TCCCAATCCAGACAACATGGTCTGCGCGGGCATCATTCATACGCAATCGC
AACAGGTGGGCTGCCTTATGCGATTGGAGCCGAACAAGCAGGCTCAGATG
TTCCGACTGACAGTTCGGGCAAGCAAGGAGACCGTAACTCGGGAAATCTG
CGATCTGTTGACGGATCAATTCGCAAGCTTTCTAGACCAT

BO29145.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:56:34
Subject Length Description Subject Range Query Range Score Percent Strand
AP-2alpha-RB 2859 CG4260-PB 1..2856 17..2872 14265 100 Plus
AP-2alpha-RA 2823 CG4260-PA 62..2820 114..2872 13780 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:56:36
Subject Length Description Subject Range Query Range Score Percent Strand
AP-2alpha-RB 3432 CG4260-RB 58..2917 13..2872 14285 100 Plus
AP-2alpha-RA 4711 CG4260-RA 592..3350 114..2872 13780 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:56:33
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 410127..411066 2308..1369 4685 99.9 Minus
2L 23513712 2L 411122..411721 1381..782 2985 99.8 Minus
2L 23513712 2L 411781..412237 785..329 2285 100 Minus
2L 23513712 2L 409790..410073 2592..2309 1420 100 Minus
2L 23513712 2L 412446..412658 329..117 1050 99.5 Minus
2L 23513712 2L 409532..409737 2797..2592 1030 100 Minus
2L 23513712 2L 412724..412828 117..13 525 100 Minus
2L 23513712 2L 409391..409467 2872..2796 385 100 Minus
Blast to na_te.dros performed on 2014-11-26 21:56:34 has no hits.

BO29145.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-10-14 10:57:37 Download gff for BO29145.complete
Subject Subject Range Query Range Percent Splice Strand
alpha-Adaptin-RB 62..2917 17..2874 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:41:36 Download gff for BO29145.complete
Subject Subject Range Query Range Percent Splice Strand
AP-2alpha-RB 62..2917 17..2874 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:46:29 Download gff for BO29145.complete
Subject Subject Range Query Range Percent Splice Strand
AP-2alpha-RB 62..2917 17..2874 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:46:29 Download gff for BO29145.complete
Subject Subject Range Query Range Percent Splice Strand
2L 409389..409465 2798..2874 97 <- Minus
2L 411129..411718 785..1374 100 <- Minus
2L 411782..412237 329..784 100 <- Minus
2L 412447..412658 117..328 99 <- Minus
2L 412725..412824 17..116 100   Minus
2L 409532..409736 2593..2797 100 <- Minus
2L 409790..410073 2309..2592 100 <- Minus
2L 410127..411060 1375..2308 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:41:36 Download gff for BO29145.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 409389..409465 2798..2874 97 <- Minus
arm_2L 409532..409736 2593..2797 100 <- Minus
arm_2L 409790..410073 2309..2592 100 <- Minus
arm_2L 410127..411060 1375..2308 100 <- Minus
arm_2L 411129..411718 785..1374 100 <- Minus
arm_2L 411782..412237 329..784 100 <- Minus
arm_2L 412447..412658 117..328 99 <- Minus
arm_2L 412725..412824 17..116 100   Minus

BO29145.pep Sequence

Translation from 16 to 2890

> BO29145.pep
MERAEGCEVVSPIDQSRGGKESEASADESLLFYCKSKEAEVKRINKELAN
IRSKFKGDKTLDGYQKKKYVCKLLFIFLLGHDIDFGHMEAVNLLSSNKYS
EKQIGYLFISVLVNTNSDLIRLIIQSIKNDLQSRNPVHVNLALQCIANIG
SRDMAESFSNEIPKLLVSGDTMDVVKQSAALCLLRLFRSSPDIIPGGEWT
SRIIHLLNDQHMGVVTAATSLIDALVKRNPDEYKGCVNLAVSRLSRIVTA
SYTDLQDYTYYFVPAPWLSVKLLRLLQNYNPVTEEAGVRARLNETLETIL
NKAQEPPKSKKVQHSNAKNAVLFEAINLIIHSDSEPNLLVRACNQLGQFL
SNRETNLRYLALESMCHLATSEFSHEEVKKHQEVVILSMKMEKDVSVRQM
AVDLLYAMCDRGNAEEIVQEMLNYLETADYSIREEMVLKVAILAEKYATD
YTWYVDVILNLIRIAGDYVSEEVWYRVIQIVINREEVQGYAAKTVFEALQ
APACHENMVKVGGYILGEFGNLIAGDSRSAPLVQFKLLHSKYHLCSPMTR
ALLLSTYIKFINLFPEIRTNIQDVFRQHSNLRSADAELQQRASEYLQLSI
VASTDVLATVLEEMPSFPERESSILAVLKKKKPGRVPENEIRESKSPAPL
TSAAQNNALVNNSHSKLNNSNANTDLLGLSTPPSNNIGSGSNSNSTLIDV
LGDMYGSNSNNNSSAVYNTKKFLFKNNGVLFENEMLQIGVKSEFRQNLGR
LGLFYGNKTQVPLTNFNPVLQWSAEDALKLNVQMKVVEPTLEAGAQIQQL
LTAECIEDYADAPTIEISFRYNGTQQKFSIKLPLSVNKFFEPTEMNAESF
FARWKNLSGEQQRSQKVFKAAQPLDLPGARNKLMGFGMQLLDQVDPNPDN
MVCAGIIHTQSQQVGCLMRLEPNKQAQMFRLTVRASKETVTREICDLLTD
QFASFLDH

BO29145.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:33:34
Subject Length Description Subject Range Query Range Score Percent Strand
AP-2alpha-PB 952 CG4260-PB 1..952 1..952 4842 100 Plus
AP-2alpha-PA 940 CG4260-PA 22..940 34..952 4676 100 Plus
AP-1gamma-PI 963 CG9113-PI 55..711 44..716 535 27.8 Plus
AP-1gamma-PF 963 CG9113-PF 55..711 44..716 535 27.8 Plus
AP-1gamma-PG 963 CG9113-PG 55..711 44..716 535 27.8 Plus