BO29150.complete Sequence
1810 bp assembled on 2011-09-19
GenBank Submission: KX795569
> BO29150.complete
GAAGTTATCAGTCGACATGCAGGAGCTCAAGCAACGTTTTGAGCGACGCC
AGTTGGCGGATGACCTGAAACAAAAACAGGTAATCCAGGATCATCTGCTG
CAGAAAATCCTGTACTCAAAGCGCCTGCTGGTGGACCATGTGGAGGCACT
GGAGCACTGCATGCAGGAGCTGCAGACAGCCTCCAGTGCGAGTTCCGGCC
GGCAATTGCTGACGACGAGGAACGCCTGCCTGATATTGGGTGGCACTCTG
TTGGAGCACCTGATAACCCCACGGGGCATCCGGTACACCATGGTTCCATC
CATCCTCATTTCGGGTACCTTTGCTGCACTGTTCGCTGTGAAGAGCGTCT
TCGTTTGCCGCAACAAAATCGTGGAACGGAAGTTGGAGCAACTGGTCAAG
ACCATCGATGAGTTCGGCAACTGCATCCGTCGAAATATGACGTACTTTCA
GGAGATCATCATCATGAAACAGGCCGAGCTCATAGAATCCCGTCAAATTG
AGCGCGCTTGGGATTGCATAACGGCCGCCAAGGAGGTTACCGAAATCCTG
TACGATGCCACCCGAAAACTGGAGACGGACTATCCCCTGCCGACAAAGTA
CAGCGCCTACTATGCGCCCATGGAAGAACTGCGGGAGTGCGAGTACTTCA
AGAACAATGTCACGGACTACAGTCCCAAGCACATAAAAGACTTTCACAAC
ATCTTCGCCTATGTGCAGTCACAATACCTGCTCCGGCTGGCACTCACCAT
CACAACTCGTCCCTCGATCTCTCAGCTGAGCGAGGATCTGGTGAAAATCG
ACAGCCTGGTGAGGCAGTTGGTACAAGAGGAGGAGCAGCACTTCAGTAAT
CTAGCATTAGCCCTGCAGAACAAGAAGCAATTGGAACTGGCTGAGCTGAA
TGCGACTAGAGCAGAGCAACAGCAGAGTGGACCAATTGCTGTGCTGCAGC
ACTCCTCGCTAAAACTAAGCGCCTGCATGGTGGCCGTGGCCGCAGAATGT
CAAGCTCTGGACGTGACTCTTCAAAAACTCACTGTCACAGAGGCGGCAAA
AAAGAACAACTCCAAGGAGCTGGTGGCTGTGGCCAATAATATGCATGGCA
TCGAAAATGCCTTGGCCGTTTGCTGTGATGATTTCCAGCGATTGATGCTG
GTCTACAACAAGTTCTTGCACAGTCAGCTGGATTTGGAAGGAGAGTTGCC
GAAGCCCAAGCAGGATCTCGACGATGAATTCCCCGAGAGCATTCTTAGGG
TTGAGTTCTCGCAGAACGTGGATGCTCCGCAGCAGAGGGATGACTTTTAT
GCATACATGTACGATGAAAACGAGGAGCAGCACTTTGAAGCTGAGCAGAA
TGCACCGTTTCCCTCGCCGGAAAAGGAACTGCTTAACTTCGAGAAGCGTA
TTACCAAGGGAAGGTTTAAGCCTGTCCTCAAACAGCTGAAAGATCGCATC
GATCCCATCAGACAAGTTATGCTGGAAAAGGAGCGTGAGGTTCTGGCCTC
TAAGGGCATAAATGTGGACGAGCTGTTTGGCAAAATGGAAAGAGTCGAGC
AGCAGCAGGAGGACAATCGCTTGGCGGATGCCGCACCCTTACCTGTCTAC
GAATCCTCCAGCAACTCAGATTCGGACTCTGCTGACGAAGAGGCATTCAG
GCGACGCAGCAAACAGCACAAGGAGCGTGATAATTTTGCTGAAATGCGTC
AATTTCTTGCTCAGAAGCAGGCTATTAATCTGTTTAAGCTACCACCACCA
CCTGTGGCCGCCGGTGGGGAGGAGCTGCTTGAAAGTGAATGCGCAAGCTT
TCTAGACCAT
BO29150.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:58:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7705-RA | 1779 | CG7705-PA | 1..1776 | 17..1792 | 8880 | 100 | Plus |
| CG7705-RB | 474 | CG7705-PB | 1..470 | 17..486 | 2350 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:58:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7705-RA | 2328 | CG7705-RA | 45..1822 | 15..1792 | 8890 | 100 | Plus |
| CG7705-RB | 2780 | CG7705-RB | 1171..2274 | 689..1792 | 5520 | 100 | Plus |
| CG7705-RB | 2780 | CG7705-RB | 45..516 | 15..486 | 2360 | 100 | Plus |
| CG7705-RB | 2780 | CG7705-RB | 575..777 | 487..689 | 1015 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:58:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18675132..18676235 | 1792..689 | 5520 | 100 | Minus |
| 3R | 32079331 | 3R | 18676890..18677303 | 486..73 | 2055 | 99.8 | Minus |
| 3R | 32079331 | 3R | 18676629..18676831 | 689..487 | 1015 | 100 | Minus |
| 3R | 32079331 | 3R | 18677363..18677414 | 81..30 | 260 | 100 | Minus |
Blast to na_te.dros performed 2014-11-27 07:58:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 1731 | 4648 | 1731 DMTN1731 4648bp Derived from X07656 (g8700) (Rel. 36, Last updated, Version 6). | 1751..1796 | 1298..1343 | 122 | 73.9 | Plus |
| Fw2 | 3961 | Fw2 FW2 3961bp | 1430..1494 | 124..190 | 114 | 65.7 | Plus |
BO29150.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-09-19 10:42:46 Download gff for
BO29150.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7705-RA | 64..1839 | 17..1794 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:06:54 Download gff for
BO29150.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7705-RA | 64..1839 | 17..1794 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:08:22 Download gff for
BO29150.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7705-RA | 47..1822 | 17..1794 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:08:22 Download gff for
BO29150.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18675130..18676235 | 689..1794 | 99 | <- | Minus |
| 3R | 18676630..18676831 | 487..688 | 100 | <- | Minus |
| 3R | 18676890..18677296 | 80..486 | 100 | <- | Minus |
| 3R | 18677365..18677412 | 32..79 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:06:54 Download gff for
BO29150.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14500852..14501957 | 689..1794 | 99 | <- | Minus |
| arm_3R | 14502352..14502553 | 487..688 | 100 | <- | Minus |
| arm_3R | 14502612..14503018 | 80..486 | 100 | <- | Minus |
| arm_3R | 14503087..14503134 | 32..79 | 100 | <- | Minus |
BO29150.pep Sequence
Translation from 16 to 1810
> BO29150.pep
MQELKQRFERRQLADDLKQKQVIQDHLLQKILYSKRLLVDHVEALEHCMQ
ELQTASSASSGRQLLTTRNACLILGGTLLEHLITPRGIRYTMVPSILISG
TFAALFAVKSVFVCRNKIVERKLEQLVKTIDEFGNCIRRNMTYFQEIIIM
KQAELIESRQIERAWDCITAAKEVTEILYDATRKLETDYPLPTKYSAYYA
PMEELRECEYFKNNVTDYSPKHIKDFHNIFAYVQSQYLLRLALTITTRPS
ISQLSEDLVKIDSLVRQLVQEEEQHFSNLALALQNKKQLELAELNATRAE
QQQSGPIAVLQHSSLKLSACMVAVAAECQALDVTLQKLTVTEAAKKNNSK
ELVAVANNMHGIENALAVCCDDFQRLMLVYNKFLHSQLDLEGELPKPKQD
LDDEFPESILRVEFSQNVDAPQQRDDFYAYMYDENEEQHFEAEQNAPFPS
PEKELLNFEKRITKGRFKPVLKQLKDRIDPIRQVMLEKEREVLASKGINV
DELFGKMERVEQQQEDNRLADAAPLPVYESSSNSDSDSADEEAFRRRSKQ
HKERDNFAEMRQFLAQKQAINLFKLPPPPVAAGGEELLESECASFLDH
BO29150.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:03:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7705-PA | 592 | CG7705-PA | 1..592 | 1..592 | 3004 | 100 | Plus |
| CG7705-PB | 157 | CG7705-PB | 1..157 | 1..157 | 782 | 100 | Plus |
