BO29152.complete Sequence
976 bp assembled on 2011-08-26
GenBank Submission: KX796919
> BO29152.complete
GAAGTTATCAGTCGACATGCGCGTCTACCTGGCCCTGCCGCTCCTGCTGC
TGGGCATCGGCCTCAGTTTGGCCCAGTACCAGTATCAAGCGCCCCACCAA
ACCCTCGCCCAGCAATTCGCCGACGTGGTGGATGTGGTCGATCCTGCAGA
ACAATCTATCAAAGCAGTGCGACCACCGAAGAGCCGCAATCAGTGCACCG
CCAAGCAGAACTGCTTCTGCGGCACTCCGAATGTCAACCGTATCGTGGGC
GGCCAGCAGGTGCGCTCCAACAAGTATCCTTGGACCGCCCAATTGGTAAA
GGGTCGTCATTATCCCCGCCTCTTCTGCGGCGGTTCCCTAATCAATGATC
GCTATGTGCTGACCGCCGCCCATTGTGTGCATGGGAACAGGGATCAGATC
ACCATTCGCCTGCTCCAGATCGACAGATCCTCCCGGGATCCCGGCATTGT
GCGCAAGGTCGTCCAGACCACTGTGCATCCTAACTACGATCCCAACCGGA
TTGTCAACGATGTGGCGCTGCTCAAGCTGGAGTCCCCTGTTCCACTGACT
GGAAACATGCGTCCAGTCTGTCTGCCCGAGGCCAATCATAACTTTGATGG
CAAGACCGCTGTGGTTGCTGGCTGGGGTTTGATCAAGGAGGGCGGCGTCA
CCTCCAACTATCTGCAGGAGGTCAATGTGCCCGTCATCACCAACGCGCAG
TGTCGCCAGACGCGCTACAAGGACAAGATTGCCGAGGTGATGCTCTGCGC
CGGATTGGTGCAGCAGGGTGGCAAGGACGCCTGCCAGGGCGACAGTGGTG
GCCCACTGATCGTCAACGAGGGTCGCTACAAGCTGGCCGGCGTGGTGTCC
TTCGGCTACGGATGTGCACAGAAGAATGCGCCGGGTGTCTACGCCAGGGT
GAGCAAGTTCCTGGACTGGATCCGTAAGAACACCGCCGACGGCTGCTACT
GCCAGAGTGCAAGCTTTCTAGACCAT
BO29152.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:36:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3355-RA | 945 | CG3355-PA | 1..942 | 17..958 | 4710 | 100 | Plus |
| CG3355-RB | 651 | CG3355-PB | 1..592 | 17..608 | 2960 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:36:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3355-RA | 1096 | CG3355-RA | 36..977 | 17..958 | 4710 | 100 | Plus |
| CG3355-RB | 1399 | CG3355-RB | 88..679 | 17..608 | 2960 | 100 | Plus |
| CG3355-RB | 1399 | CG3355-RB | 945..1295 | 608..958 | 1755 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:36:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 4651765..4652157 | 216..608 | 1965 | 100 | Plus |
| 2L | 23513712 | 2L | 4652423..4652773 | 608..958 | 1755 | 100 | Plus |
| 2L | 23513712 | 2L | 4651490..4651688 | 17..215 | 995 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 22:36:12 has no hits.
BO29152.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-08-26 13:54:45 Download gff for
BO29152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3355-RA | 88..1029 | 17..960 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:03:18 Download gff for
BO29152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3355-RA | 36..977 | 17..960 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:05:28 Download gff for
BO29152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3355-RA | 36..977 | 17..960 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:05:28 Download gff for
BO29152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 4651490..4651688 | 17..215 | 100 | -> | Plus |
| 2L | 4651765..4652156 | 216..607 | 100 | -> | Plus |
| 2L | 4652423..4652773 | 608..960 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:03:18 Download gff for
BO29152.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 4651490..4651688 | 17..215 | 100 | -> | Plus |
| arm_2L | 4651765..4652156 | 216..607 | 100 | -> | Plus |
| arm_2L | 4652423..4652773 | 608..960 | 99 | | Plus |
BO29152.pep Sequence
Translation from 16 to 976
> BO29152.pep
MRVYLALPLLLLGIGLSLAQYQYQAPHQTLAQQFADVVDVVDPAEQSIKA
VRPPKSRNQCTAKQNCFCGTPNVNRIVGGQQVRSNKYPWTAQLVKGRHYP
RLFCGGSLINDRYVLTAAHCVHGNRDQITIRLLQIDRSSRDPGIVRKVVQ
TTVHPNYDPNRIVNDVALLKLESPVPLTGNMRPVCLPEANHNFDGKTAVV
AGWGLIKEGGVTSNYLQEVNVPVITNAQCRQTRYKDKIAEVMLCAGLVQQ
GGKDACQGDSGGPLIVNEGRYKLAGVVSFGYGCAQKNAPGVYARVSKFLD
WIRKNTADGCYCQSASFLDH
BO29152.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 07:59:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3355-PA | 314 | CG3355-PA | 1..314 | 1..314 | 1673 | 100 | Plus |
| CG3355-PB | 216 | CG3355-PB | 1..197 | 1..197 | 1046 | 100 | Plus |
| CG4613-PC | 374 | CG4613-PC | 122..372 | 58..312 | 834 | 60.7 | Plus |
| CG4613-PB | 374 | CG4613-PB | 122..372 | 58..312 | 834 | 60.7 | Plus |
| CG18735-PA | 364 | CG18735-PA | 58..321 | 43..312 | 630 | 47.1 | Plus |
